Pseudomonas sp. ATCC 13867: H681_05640
Help
Entry
H681_05640 CDS
T02524
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00470
D-Amino acid metabolism
pdr00550
Peptidoglycan biosynthesis
pdr01100
Metabolic pathways
pdr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H681_05640 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H681_05640 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H681_05640 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdr01011
]
H681_05640 (ddl)
Enzymes [BR:
pdr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
H681_05640 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdr01011
]
Precursor biosynthesis
Amino acid ligase
H681_05640 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
ATP-grasp_5
TTL
Motif
Other DBs
NCBI-ProteinID:
AGI23008
UniProt:
M4WSD7
LinkDB
All DBs
Position
1234469..1235416
Genome browser
AA seq
315 aa
AA seq
DB search
MSDVLKSTLDPRAFGRVAVLYGGKSAEREVSLKSGAMVLQALQDGGVDAFGIDVGDDLLE
RLTREKIDRAFIILHGRGGEDGTMQGLLEIAGIPYTGSGVLASALAMDKLRTKRVWLSLG
LPTPDHAVLASEDDCRTAAAKLGFPLIVKPASEGSSIGMAKVNSEQELIAAWAGAAKYDS
QVLVEQWISGPEFTIAVLRGQVLPPIRLGTPHTFYDYDAKYLASDTRYQIPCGLDAAKEE
ELKDLTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQ
QLVLAILADSVEARG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcctcaaatccaccctcgatccccgcgccttcggtcgcgtcgccgtgctt
tacggcggcaagagcgccgagcgcgaggtatcgctgaagtccggcgccatggtcctgcaa
gcgctgcaggacggcggtgtggatgccttcggcatcgacgtgggcgacgatctgctggag
cgtctgacccgcgagaagatcgaccgtgccttcatcatcctccacggtcgtggcggtgaa
gacggcaccatgcaggggctgctggaaatcgccggcattccctacaccggcagcggcgta
ctggcgtccgcgctggcgatggacaagctgcgcaccaagcgcgtgtggctgagcctgggc
ctgccgacgcctgaccatgccgtgctcgccagcgaggacgattgccgcaccgccgccgcg
aagctcggcttcccgctgatcgtcaagccggccagtgaaggttcgagcatcggcatggcc
aaggtgaacagcgagcaagagctgatcgctgcctgggcgggggccgcgaaatacgattcg
caggtgctcgtcgagcaatggatcagcgggcccgaattcaccatcgccgtcctgcgtggc
caggtgttgccgcccattcgcctgggtactccgcacaccttctacgactacgacgccaag
tacctcgccagcgatacccggtaccagattccctgtggcctcgacgccgccaaggaagag
gaactgaaggacctgaccgcgcgcgcctgcgatgccctcggcatccagggctggggccgg
gccgacgtgatgcaggatgccgaagggcgtttctggcttctggaagtgaacaccgcaccg
ggcatgaccgaccacagcctggtgccgatggccgcgcgcgcggccggcctggatttccag
caactggtgctggcgatcctcgccgacagcgtcgaggcaagggggtaa
DBGET
integrated database retrieval system
