Pseudomonas sp. ATCC 13867: H681_09950
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Entry
H681_09950 CDS
T02524
Name
(GenBank) putative AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00061
Fatty acid biosynthesis
pdr00071
Fatty acid degradation
pdr01100
Metabolic pathways
pdr01212
Fatty acid metabolism
pdr02024
Quorum sensing
Module
pdr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H681_09950
00071 Fatty acid degradation
H681_09950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H681_09950
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdr01004
]
H681_09950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdr04147
]
H681_09950
Enzymes [BR:
pdr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H681_09950
Lipid biosynthesis proteins [BR:
pdr01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
H681_09950
Exosome [BR:
pdr04147
]
Exosomal proteins
Exosomal proteins of breast milk
H681_09950
Exosomal proteins of breast cancer cells
H681_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AGI23864
UniProt:
M4WVR6
LinkDB
All DBs
Position
2175271..2176938
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AA seq
555 aa
AA seq
DB search
MVKAVRLPLDLFYQRETSHPNKPYLVQPQGGGEVQTLTWGEVGDQARRAAAWLRSLELPP
GSRVAIISKNCAHWIVADIAIWMAGHVSVPLYPNLTADSVRQVMTHSEAAVAFVGKLDDW
PAMVDGIPPGVPTVALPLHPPGRFDHQWADLQAQSPIRDDPRPDAATLATLIYTSGTTGT
PKGVMHTFGNFAFAASHAIDLFGVGEEDRLLSYLPLCHVAERMFVQMASIYAGQTIFFAE
SLDTFAADMRRARPTVFFGVPRIWTKFQMGVYAQMPAQKLERLLRLPIVGRLVSRKVLAG
LGLDAVRYALCGAAPVPEALLDWYQRLGLNVLEVYGMTENCGYSHVCRPGEQKKGWIGRN
SPGVEVRISDEGEVQVRSGATMLGYYKDPQRTDETITRDGFLRTGDKGEQDADGNLRLTG
RIKEIFKTAKGKYVAPAPIENRLAVHSRIEQICVVGDGLIAPLGLCVLSDIGRQEAANGA
RSELEQSLRTLLEEVNNALDKHERLAGLVLVRDAWTVDNGFLTPTLKIKRNVVEGTYGQR
FNEWAERREAVQWHD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaagcagtccgattaccgctcgatctgttctatcagcgcgagacgagtcacccg
aacaagccatacctcgtacagccgcagggcggcggcgaggtgcagacgctcacctggggc
gaagtgggcgatcaggcgcgccgtgccgccgcctggctgcgcagcctggaactgccgccg
ggtagccgcgtggcgatcatttccaagaactgcgcgcactggatcgtcgccgatatcgcc
atctggatggccggccacgtatccgtgccgctgtaccccaacctcaccgccgattccgtg
cgccaggtgatgactcattccgaggcggcggtggccttcgtcggcaagctggacgactgg
ccggcgatggtcgacggcattccgccgggcgtgccgaccgtggcgctgccgctgcatccg
ccagggcgcttcgatcaccaatgggccgatctccaggcgcagtcgccgatccgtgacgat
ccgcgcccggacgccgccaccctggcaaccctcatctacacctccggcaccaccggcacg
cccaagggcgtgatgcataccttcggcaacttcgccttcgccgccagccatgccatcgac
ctgttcggtgtcggcgaggaggaccgcctgctgtcctacctgccgctgtgtcacgtggcc
gagcgcatgttcgtgcagatggcgtcgatctacgccgggcagacgatcttcttcgccgaa
agcctggacaccttcgccgccgacatgcgccgtgcgcggcccacggtgttcttcggcgtg
ccacgcatctggaccaagttccagatgggcgtttatgcgcagatgccggcgcagaagctc
gagcgcctgctgcgcctgcccatcgtcgggcgcctggtcagccgcaaggtgcttgccggc
ctcggcctggatgccgtgcgctacgcactgtgcggcgccgcgcctgtgcccgaagcgctg
ctcgactggtatcagcgcctgggcctgaacgtgctggaggtctatggcatgaccgagaac
tgcggctactcccacgtctgccggcccggcgaacagaaaaagggctggatcggccgcaac
agtcccggcgtggaagtgcgcatcagcgacgagggcgaggtgcaggtgcgcagcggcgcg
accatgctcggctactacaaggatccgcagcgcaccgatgaaaccattacccgcgacggc
ttcctgcgcaccggcgacaagggcgagcaggacgccgatggcaacctgcgcctgaccgga
cggatcaaggaaatcttcaagaccgccaagggcaagtacgtggcgccggcgccgatcgag
aaccgcctggccgtgcactcgcggatcgagcagatctgcgtggtcggcgatggcctgatc
gcgcccctggggctgtgcgtgctgtcggacatcggccggcaggaagcggccaacggcgcc
cgtagcgagttggagcaaagcctgaggacgctgctggaagaggtgaacaatgccctggac
aagcacgagcggctggccgggctggtgctggtccgcgatgcctggacggtggacaacggc
ttcctcacgccgaccctgaagatcaagcgcaatgtggtggaaggtacctacggccagcgc
ttcaatgaatgggcggagcgccgcgaggcggtgcagtggcatgactga
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