Prunus dulcis (almond): 117630512
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Entry
117630512 CDS
T07328
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117630512
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pdul01001
]
117630512
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117630512
03036 Chromosome and associated proteins [BR:
pdul03036
]
117630512
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
117630512
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117630512
Protein kinases [BR:
pdul01001
]
Serine/threonine kinases: Other
TAF1 family
117630512
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117630512
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
117630512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
117630512
NCBI-ProteinID:
XP_034219113
LinkDB
All DBs
Position
1:complement(41812130..41830400)
Genome browser
AA seq
1905 aa
AA seq
DB search
MGHDSDGGSQDGRDEDDEEEYEEAGRGSRFLGFMFGNVNDSGGLDADYLDEDAKEHLAAL
ADKLGPSITGIDLSVKSPQTSTDAVEEGEYYYDEKAENAVNYFDIDEDFEGPEIQAATEE
DHLLPRKDYLSAQVSLATLELTHSVFDDEDYDEEIEQEVEHEVVEKNVDVETISLPGCLA
GDSKGEKYSEDDYQIGGLDSENLDAHVEEFQEALSDKSATPLPVLCIEDGLVILRFSEIF
GIHVPLKKAEKREHRYSVPKDRYKSMDVSDIIEEDEEAFLKGSSHGLQSLKQADAMKYDI
SALNDTDSENAKFGVLKAANSVALLDDGPIKDSCLNAEPLKEDQICDISVGRQSPSCSKF
YPLDQLDWEEGIVWGNSPVASDNSDESCEISGPDEVSINSETEPDCGSQNILLEPPKEPD
EKDHAVVLHSSCSLLEPFGSRNSSELLCLPVSESRCHPQLLRLESRFEVDDHTDGTMESV
GEKLHQSDAVREFSKLTSQNRDMLKGSWLDQIIWDPDMPTGKPKLILDLQDEQMLFEILD
NKESEHLRLHSGAMIVTRPVNLSNGDSFELPGHGGQFGWRYVANDKHYSNRKTSQQLKSN
SKRRTVQGIKIYHSQPALMLQTMKLRLSNKCVANFHRPKSLWYPHDNEVAVKERGKLPTQ
GPMKIIIKSLGGKGSKLHVDAEETVSSVKSKASKKLDFKPSETVKLFYLGKELEDDKSLA
AQNVQPNSLLHLVRTKIYLLPKAQKIPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEE
RPLLLSNAGMGARLCTYYQKSAPDDQTGSLLRSDSNSLGHVISLNPADKSPFLGDTKAGC
SQSSLETNMYRAPVFSHKVPSTDYLLVRSAKGKLSIRRIDKLNVVGQQEPLMEVMSPGTK
NLQTYMINRLLVYMCREFRAAEKRHFLPCIRSDELPSQFPYLSEAFLRKKLKEHANLQRG
SNGQWMWVKKRNFRIFSEDELRNMVKPEEVCAYESMQAGLYRLKHLGITETHPSAISSAM
SRLPDDAITLAAASHIERELQITPWNLSSNFVACTQGKENIERLEISGVGDPSGRGLGFS
YVRAAPKASMSSAVVKKKSAATRGGSTVTGTDADLRRLSMEAAREVLLKFGVSDELIARQ
TRWHRIAMIRKLSSEQAASGVKVDANTISKYARGQRMSFLQLQQQNREKCQEIWDRQVQS
LSALDGEENESDSEGNNSDLDSFAGDLENLLDAEECEEVLGGDHESNHDKLDGVKGLKMR
RRPSLAQAEEEIEDEAAEAAELCRLLMDDETERRKKKKTRVSGEELGLAPGSRTNYGFEN
ADRAKKIIGAAQPDESYTSKENPVGDVKLVENPLKRKKAGTLKGMKNNDITHTGLMNKKL
KISGDGGKTYKEKKSAREKFICGACHQAGHMRTNKNCPKYGEDQETHSDTPDLDKADGKI
TALNPSNQAQQKTTTKKLVPKSATKIAVVEASDVDVGLSTKVLPLKFKCGSTEKLPDKQA
LGETESSERPVASDPETGKPTFKVNKIIISNKMKPENAPVESQKPPIVIRPPTDTDKGHV
ESQKPTIVIRPPANTDRDQVESQKPLIAKRPSMEAQREQHHKKIIIKRPKEIIDIDQVSQ
DGSTHVEHRKTKRIVELTSSEKNRKEENMYLAKEAAKKKARDDKRSREEQEKRRNEERLK
EERARRLYEEEMRMIEEQERLAEIRRYEAVIRQEREEEERQKAKKNKQKKKRPEIREDYI
EDSRARRFDKRMQERDRGAKRRPVVELGRYGGESAPITKRRRGGEVGLANILERIIETLK
DRIEVSYLFLKPVSKKEAPDYLDIIERPMDLSTIREKVRKMEYKSREQFRHDVWQITYNA
HKYNDGRNPGIPPLADQLLELCDYMLVENDESLTEAEAGIESADF
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgattcagatggtggttcccaagatggaagggatgaagatgatgaggaagaa
tatgaggaggctggcaggggtagtcgatttcttggatttatgtttggcaatgtcaatgac
tctggtggtcttgatgccgattaccttgacgaggatgcaaaggaacacctcgctgcactg
gctgacaagctgggtccgtctataacaggcatagatctgtcagtaaaatcaccacaaaca
tcaactgatgctgttgaagaaggtgaatattattatgatgagaaggctgaaaatgcagtg
aattattttgatattgatgaggattttgagggacctgagattcaagctgctactgaggag
gaccatttgttgcccagaaaggattatctttctgctcaagtttcattggctactttggag
ctcacacattctgtgtttgatgatgaagattacgatgaagaaattgaacaggaagtggag
catgaggtggttgaaaaaaacgttgatgttgaaactatctctttaccaggttgtcttgca
ggggattctaaaggagaaaaatattctgaggatgattatcaaattggcggtttggactct
gaaaatttggatgctcatgtagaagagtttcaggaagcgctttcagataaaagtgccact
ccgctgccagttctatgcatagaagatggattggtgatcttaagattctcggaaatcttt
ggtattcatgtgcccttgaagaaggctgagaaaagagaacatagatactctgttcctaaa
gataggtacaaatccatggatgtttcggatatcattgaagaggatgaagaggcattctta
aaaggatctagtcacggattgcaatctttgaaacaggcagatgcaatgaaatatgacatc
tcagcactcaatgacactgactcggaaaatgcaaagtttggtgttcttaaagcggctaat
tcagttgctctgctggatgacgggccaataaaggactcctgtctcaatgcagaaccattg
aaagaggatcaaatttgtgatatttctgtgggaaggcagtcaccttcgtgttcaaaattt
tatcctcttgatcaactagactgggaagaaggaattgtttggggcaattctcctgtagca
agtgacaattctgatgagagttgtgaaatttcgggacctgatgaagtttcaattaatagt
gaaacagaacctgattgtgggtcacaaaatattctgttagagcccccaaaagaacctgat
gagaaggatcatgctgttgtgctgcatagctcatgtagtctattggagccttttggctca
agaaattcatcagaacttttatgtcttcctgtctcagaaagcagatgccatccccaactt
ttaaggctagaatctcgatttgaagtggatgaccatacagatggtacaatggagagtgtc
ggtgagaagcttcatcagagcgatgctgtgagggaatttagcaaactcacttcacagaat
agagacatgctaaaaggatcctggttagaccagataatttgggacccagatatgcctact
ggaaagccaaaacttatcctcgatcttcaagatgagcaaatgctttttgagattttggat
aacaaggaaagtgaacatcttaggcttcattcaggggccatgattgtgactcgcccggta
aacttgagcaatggggattcttttgagctgccaggtcacggaggtcaatttggttggcga
tatgttgctaatgataaacactattcaaataggaaaacttctcagcaactgaaatcaaat
tctaaaagacgcacagtgcagggcataaagatttatcactcacaacctgccctgatgtta
cagacaatgaaactgaggttaagcaataagtgtgtggctaattttcaccgaccaaaatct
ttatggtatccccatgacaatgaagtggctgtaaaagaacgagggaagctccccactcaa
ggaccaatgaaaattatcataaagagcttgggtgggaaaggaagtaagcttcatgtggat
gctgaggaaacagtctcttctgttaaatcaaaagcttcaaaaaagctagattttaagcca
tccgaaactgtgaagttgttttatttagggaaggaacttgaagatgataaatctcttgca
gcccagaatgttcaaccaaattctttgcttcatcttgttcgtacaaaaatatacttgttg
ccaaaggcacaaaagattcctggtgagaataaatctttgcggcctcctggagcatttaag
aagaaatctgacctttctgtgaaagatggtcatgtgtttctaatggagtactgtgaggaa
agacctttacttttgagcaatgctggtatgggtgcaagattgtgcacttattatcaaaaa
tcagccccagatgatcaaactggttctttgttacgcagtgacagcaacagtttgggacat
gtcatctcactaaatcctgctgataaatcaccttttcttggagatacaaaagctggttgt
agtcagtcatcgcttgaaacaaacatgtatagagctcctgtattttctcataaggtgcca
tcaactgattatttgttggttcgttctgcaaagggaaagctttcaattagacgcattgac
aaacttaatgttgttggccaacaggaacctctcatggaggtaatgtctcctggaactaag
aatcttcaaacttatatgattaacaggctcttagtctacatgtgccgagagttccgtgct
gccgaaaagcgccattttcttccttgtatccgctcagatgagctaccttcacaatttcct
tatctatctgaagcctttcttcggaagaagctgaaggaacatgcaaatttgcagagggga
tcaaatggacaatggatgtgggttaagaaacgcaacttccgaattttctcagaggatgaa
ttaagaaatatggtgaagccagaagaggtgtgtgcctatgaaagcatgcaagctggtctt
taccggctcaaacatttgggaattactgaaacacatccctctgccatatcatctgcaatg
agtcgtctccctgatgacgcaattactctggctgctgcatcacacattgaaagggaactg
cagattactccatggaacttgagtagcaattttgtagcatgtacacagggaaaagaaaat
attgagcgtttggaaatatctggtgttggtgatccatctggccggggcctaggttttagt
tatgttcgtgctgcaccaaaagcatctatgtcaagtgcagtggtgaaaaaaaaatctgct
gctactcgaggaggttccactgttaccggaacagatgctgatctacgcagattaagcatg
gaggctgcacgagaggttcttcttaaattcggtgtttctgatgaactgattgcgagacag
actagatggcatcggattgcaatgatacgcaagctttcaagtgagcaagctgcatctggg
gtaaaagttgatgcaaacactatcagtaaatatgcacgtggccagcgtatgtccttcctt
cagctacagcagcagaaccgggagaagtgtcaagaaatttgggatcggcaagttcagagt
ctttcagctctagatggggaagaaaatgagagcgactctgaaggaaataatagcgatctg
gattcctttgctggggatttagaaaatttgcttgatgcagaagaatgtgaagaagtgcta
ggcggtgatcatgaatccaatcatgataaattggatggtgttaaagggcttaaaatgaga
aggcgcccttccttggctcaggcagaagaggagattgaagatgaagcagcagaagcagca
gagttatgcaggttgcttatggatgatgaaactgagaggaggaagaagaagaaaacaaga
gtttctggggaggagctggggttggctcctgggtcgcgaacaaattatggcttcgaaaat
gcagatagggcgaagaaaataattggtgcagcacaacctgatgaatcctatacttcaaaa
gaaaatccagttggagatgtgaaactggtggaaaatcctcttaaaagaaaaaaggccgga
acacttaaaggaatgaaaaataatgatatcacacatactggtctgatgaataagaaactg
aagatatcaggagatggtggcaagacatataaggagaagaaatcagcacgagagaaattt
atatgtggagcatgtcatcaggctggacacatgagaacaaacaagaactgccccaagtat
ggtgaagatcaggaaacacacagcgacactccagatctggataaagcagatggaaagatc
actgctctgaatccatctaatcaggctcagcagaaaactacgacaaagaagctggtacct
aaaagtgcaaccaaaattgccgtggttgaagcttctgatgtcgacgttggtctgagtaca
aaggttcttccattgaaattcaaatgtgggtcaactgaaaagcttcctgataaacaggct
cttggagagacagagagctctgaacgtccggtggcatctgatccggaaactgggaagccc
acttttaaggtgaacaagataataatatcgaacaagatgaaacctgaaaatgcacctgtt
gaatctcagaagccacctattgtgatacggcctcccacagatacagataagggccatgtc
gaatcacaaaagccaactattgttatacggccaccagcaaatacagatagagaccaggtg
gaatcgcaaaagcccttaattgctaaacgaccatcaatggaggcacagagagagcaacat
cataagaaaattataattaaacgtccaaaagaaattattgatatagatcaggtcagtcag
gatgggagtactcatgttgaacataggaaaactaaaagaattgttgaattgacaagttct
gaaaagaacaggaaggaagagaacatgtatttggctaaggaagctgcaaaaaagaaagct
agagatgataagagatcaagggaggagcaagaaaaacggagaaatgaagagagattgaaa
gaagagagggccaggaggctttacgaagaggaaatgagaatgatagaggagcaagaaaga
ctagcagagattagaagatatgaagcagtcatcagacaagagagggaagaagaagaacgc
cagaaagcaaagaagaacaaacagaagaagaaaaggcctgagataagagaggattatata
gaggactcacgagcaagaagatttgacaaaaggatgcaagaaagagatcggggtgcaaaa
aggaggccagttgttgaattgggaaggtatggtggagaatctgccccaataacaaagcgt
cgtagagggggagaggttggtctggcaaacatcttggagcgtattatagaaaccctcaaa
gatcgaattgaagtatcgtatctttttcttaaaccagtatccaaaaaggaagctcctgat
tacctggacatcatagagcgccccatggatctgtctacaatcagggagaaggtgaggaaa
atggagtacaagagcagggagcaattcaggcacgatgtgtggcagataacttataatgct
cacaaatataatgatgggcgtaatccaggtatacctcctctcgcagatcagctcttagag
ctttgtgactatatgttggttgagaatgacgaaagcttgactgaagctgaagcaggcatt
gaatctgcagatttttag
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integrated database retrieval system
