Prunus dulcis (almond): 117630978
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Entry
117630978 CDS
T07328
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117630978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117630978
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
117630978
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
117630978
NCBI-ProteinID:
XP_034219758
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All DBs
Position
6:8396824..8410252
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AA seq
950 aa
AA seq
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MAPIPPDNGVEGDDEREEEGEEEEEEEEEEEEEEEEEEPRLKYQRMGGSIPTLLTSDVAT
CIAVAERMIALGTHGGTVHILDFLGNQVKEFPAHTAAVNDLSFDIEGEYIGSCSDDGSVV
INSLFTDEKMRFEYHRPMKAIALDPDYAKKSSRRFAAGGLAGHLYYNTKRWLGFRDQVLH
SGEGPIHAVKWRTSLIAWANDAGVKVYDTANDQRITFIERPRGSPRPELLLPHLVWQDDT
LLVIGWGTSIKITSIKTNQSRAANGTVKHVSMSMSNLNQVDIVASFQTSYFISGIAPFGD
SLVVLAYIPGEEDGEKEFSSSVPSRQQGNAQRPEVRIVTWNNDELSTDALPVHGFEHYKA
KDYSLAHAPFSGSSYAGGQWAEGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLQHGWHEKA
LAAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLR
QLPVLVPYIPTENPRLRDTAYEVALVALATNPSFHTELLSTVKSWPPVIYSSLPVISAIE
PQLNTSSMTDALKEALAELYVIDGQYEKAFSLYADLLKPDIFSFIEKHNLYDSIREKVVQ
LMMLDCKQAVPLLIQNKDLITPSEVVKQLLNASDKCDSRYFLHAYLHSLFEANPHAGKDF
HDVQVELYADYDSKMLLPFLRSSQHYKLEKAYEICIGRGLLREQVFILGRMGNAKQALSV
IINNLGDIEEAMEFVNMQHDDELWEELIQQCLHKPEMVGVLLEHTVGNLDPLYIVNMVPN
GLEIPRLRDRLVKIITNYRTETSLRHGCNDILKADIVNLLVKYYKEAIHGIYLSNEEDEA
RTKRNDSRASQVIEKSPGVRRMEVKSKPRGGARCCMCFDPFSIQSLNVIVFFCCHAYHMT
CLMDSTYTSGIKGSGATSSESVVEEDDDDTQSGDSRMRCILCTTAASRVK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggctccgattccgccagataacggcgtagaaggagacgatgagagagaggaagagggc
gaagaagaagaagaggaagaagaggaagaggaagaggaggaggaggaggaggagccgagg
ctaaagtaccagcgaatgggaggcagcattcctacgctgttgacgagcgatgtggctacg
tgtatcgccgtcgcggaacgaatgatcgcgctcggaactcacgggggcaccgttcatatt
ctcgattttctcgggaatcaggttaaggaattccctgctcatactgctgcagtgaatgat
cttagctttgacatagaaggtgaatatataggaagctgttcagacgatgggtctgttgta
ataaacagccttttcactgatgagaaaatgaggtttgagtatcatcgcccaatgaaggct
attgctttggatccagattatgcaaaaaaatcttctaggagatttgcagctggtggttta
gctggtcatttatattataatacaaaaagatggctgggctttagagatcaggttttgcat
tctggtgaaggtcctatacatgcagtgaagtggagaacaagtctcattgcttgggctaat
gatgcaggtgtgaaagtatatgatactgcaaatgatcagcgtataacattcattgaaaga
ccacgaggaagcccacgacctgaacttttgctccctcacctagtttggcaggacgacaca
ttgttggtcatcggctggggaacatcaatcaaaataacatcgataaaaacaaatcagtct
agagcagccaatgggacagttaagcatgtctcgatgtcaatgtctaatttgaaccaggtg
gatattgtggcatcctttcagaccagctatttcatttctgggattgctccttttggtgac
tctttggtcgttctagcctatatccctggtgaagaagacggggagaaggaatttagtagc
tctgttccatcacggcagcagggaaatgcacagagaccagaagtacgtattgtaacatgg
aataatgatgagctttcaacagatgctttacctgtacatggctttgagcattacaaagca
aaggactattcccttgctcacgctcctttctcaggtagcagctatgctggtggtcagtgg
gctgaaggtgatgaaccactgtactatattgtatccccaaaggatgtagtcattgcaaaa
cccagggatgctgaagatcatattgcttggcttcttcaacatggttggcatgaaaaagct
ttggctgctgttgaagcaggccagggacggagtgaacttcttgatgaggttggttcaaga
taccttgatcatttgattgtggaaagaaaatatgctgaagccgcatctttgtgtcccaaa
ttgttgagaggatctgcttcagcatgggaaagatgggttttccactttgcgcatctgcgt
cagcttccagtattagtcccatatataccaacagaaaacccaagactgcgtgatactgct
tatgaggttgctctagtagcgctggctacaaatccatcttttcatacggagctcttgtca
actgttaaatcttggccaccggtgatttattcttcattgcctgttatctcagctatagaa
cctcagctgaatacatcgtccatgacagatgctcttaaggaggctctagcagagttgtac
gtgattgatgggcaatatgaaaaagcattttcactatatgctgatcttttgaagccagac
atattttccttcatcgaaaagcacaatttatatgattccattcgggaaaaggttgtccaa
ctgatgatgctagattgcaagcaggcagttcctttattgattcaaaacaaggatttaatt
actccatctgaagtggtcaagcaacttttgaatgcaagtgacaagtgtgattccagatat
ttcttgcatgcatatttgcattcactatttgaagcaaaccctcatgctggaaaggatttt
catgatgtgcaggtagagctttatgcagactacgattcaaagatgctacttccttttctt
cgtagtagtcaacattacaaacttgagaaggcatatgaaatttgtatcggaagaggtctt
ttaagggagcaagtcttcattcttggaagaatgggaaatgcgaaacaagccctttctgta
atcataaataatcttggggatattgaagaggctatggagtttgtaaatatgcaacatgat
gatgaactttgggaagaattaattcagcagtgtcttcataaacctgaaatggtaggcgtg
ctattggagcacacagttggaaatctagatcctctatatatagtgaatatggttcctaat
gggttggagattcctaggcttagggatcgcctagtgaaaatcatcaccaattacaggact
gaaacatctctaagacatggatgcaatgatatccttaaggctgatattgtcaacctcttg
gtcaaatactacaaagaggcaatacatggaatttacttgagcaatgaagaagatgaggca
cggacgaaaaggaatgatagcagggcttctcaggtgattgagaaatcaccaggtgtgaga
agaatggaggttaaatcaaaacctcggggtggtgcaaggtgttgcatgtgtttcgatccc
ttttctatacaaagccttaatgtcatcgttttcttttgttgtcatgcttatcacatgact
tgtcttatggattccacctatactagtggaataaaagggagtggggccacttccagtgag
agtgttgtggaagaagatgatgatgatacccaatcgggtgactctcgtatgcgttgtatc
ttatgtactactgctgctagtcgagttaagtga
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