Pseudomonas donghuensis: BV82_4641
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Entry
BV82_4641 CDS
T07361
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdw
Pseudomonas donghuensis
Pathway
pdw00300
Lysine biosynthesis
pdw00550
Peptidoglycan biosynthesis
pdw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV82_4641
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BV82_4641
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdw01011
]
BV82_4641
Enzymes [BR:
pdw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BV82_4641
Peptidoglycan biosynthesis and degradation proteins [BR:
pdw01011
]
Precursor biosynthesis
Amino acid ligase
BV82_4641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PGA_cap
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
KDN97781
LinkDB
All DBs
Position
complement(4769970..4771433)
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AA seq
487 aa
AA seq
DB search
MTMPLSKLFTQASRDPSIRELTLDSRNVRPGDLFLAVPGTRMDGREHIADALSRGAAAVA
YEAEGASVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSRLLDLVGVTGTNGKTSVTQLVA
QALDQLGQHCGLIGTLGTGFYGALQNGRLTTPDPIAVQATLNDLKKAGAKAVAMEVSSHA
LDQGRVAALAFDIAVMTNLSRDHLDYHGSMQSYEDAKARLFAWPNLRCRVVNLDDEFGRR
LAAEQGESRLISYSLKDPAASLYCREAHFDDDGVRAVIVTAQGEHSLRSRLLGRFNLSNM
LAAVGTLLALDYPLDEILKVTPTLEGPVGRMQRLGGGLKPLVVVDYAHTPDALEQVLQAL
RPHAKGQLLCLFGCGGDRDRGKRALMAEVAERLADRVLVTDDNPRSEDPQQIFADIRPGF
AQADSVEFVAGRGAAIAQFIASAGVDDVIVLAGKGHEDYQEINGERHDFSDLVEAEKALA
VWEAPHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgccattgagcaagctttttacccaggccagtcgcgatccgtcgatccgcgag
ctgaccctggacagccgtaacgtgcgcccgggcgacctgttcctggcggtaccgggtacg
cgcatggatggtcgtgagcacatagccgacgcgctcagccgcggtgcggcagcggtcgcc
tacgaagccgaaggcgccagcgtgttgccgatcaccgacgtgccgctgattccggtcaag
ggcctggcggcgcaattgtcggacatcgccgggcgtttctatggtgagccgagccgtctg
ctcgacctggtgggcgtcaccggcaccaacggcaagaccagcgttacccagctggtggcc
caggcgctggaccagctcggtcagcactgcggcctgatcggcaccctgggtaccggtttt
tatggcgcgctgcaaaacggccgcctgaccactccggacccgatcgccgtgcaggcgacc
ctcaacgacctgaagaaggccggggccaaggccgtggccatggaagtctcttcccatgcc
ctggaccagggccgggtcgcggccctggcattcgacattgcggtgatgaccaacctgtcg
cgtgatcacctcgattaccacggcagcatgcagtcttatgaagacgccaaggcgcgcctg
tttgcctggccgaacctgcgttgccgggtggtcaacctcgatgacgagtttggtcgtcgt
ctggcggccgagcagggcgagtcgcgcctgatcagttacagcctcaaggatccagccgct
tcgttgtactgccgcgaagcgcattttgacgacgatggcgtgcgcgccgtgatcgttacc
gcgcagggcgagcactccctgcgcagccgcctgctcgggcgcttcaacctgagcaacatg
ctggcggcggtcggcaccttgctggccctggattacccgctggacgaaattctcaaggtc
accccgacgctggaaggcccggtcgggcgcatgcagcgcctgggtggcggcctcaagccg
ctggtggtggtcgattacgcgcatactcccgacgccctggagcaggtgctgcaagcgctg
cgtccgcatgccaaaggccagttgctgtgcctgttcggctgcggtggcgaccgcgatcgc
ggtaagcgtgcgctgatggcggaagtggccgagcgcctggctgaccgcgtcctggtcacc
gacgacaacccgcgcagcgaagacccgcagcagatcttcgccgatatccgccctggcttt
gcccaggccgatagcgtcgagttcgttgccggtcgcggcgcggccatcgcacagtttatc
gccagcgccggcgttgacgatgtcatcgtcctggctggcaaggggcatgaggactatcag
gaaatcaacggcgagcgccacgacttctccgacctggtcgaagccgaaaaagccctcgcc
gtgtgggaggccccccatgcttaa
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