Pseudonocardia dioxanivorans: Psed_4794
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Entry
Psed_4794 CDS
T01479
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00470
D-Amino acid metabolism
pdx00550
Peptidoglycan biosynthesis
pdx01100
Metabolic pathways
pdx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psed_4794
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psed_4794
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Psed_4794
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Psed_4794
Enzymes [BR:
pdx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Psed_4794
Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Precursor biosynthesis
Amino acid ligase
Psed_4794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AEA26940
UniProt:
F4D1M8
LinkDB
All DBs
Position
complement(5132747..5133844)
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AA seq
365 aa
AA seq
DB search
MGERRTRVAVVFGGRSSEHTISCVSAGSVLAHLDRDRFDVVPVGITPDGAWVLGTDDPAR
LRIDGRTLPVVDGTGAALALPGDPTRGGLVRLDRDRAGEVFSGVDVVFPVLHGPFGEDGT
IQGLFEMAGLPYVGSGVLASAAGMDKEFTKKLLAAEGLAVGSLVVLRPGTQSLTAAQQER
LGLPVFVKPARAGSSVGITRVTSWDRLDEAVAAARVHDPKVLVEAAIVGREVECGVLEYP
DGTVRASLPAEIRLVSGSAEFYDFDAKYLDDACEFDIPAKLDDDVTERVRDQAVAAFRAL
DCQGLARVDFFVGDDGAPVVNEVNTMPGFTPISMYPRMWAETGVDYPTLLATLVDTALAR
GTGLR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagcgcaggaccagggtcgcggtggtgttcggtggccgcagctccgaacacacc
atctcgtgcgtgtcggcgggcagcgtgctcgcccacctcgaccgcgaccggttcgacgtg
gtgcccgtcggcatcacgccggacggcgcctgggtgctcggcaccgacgaccccgcccga
ctgcgcatcgacggccgcaccctgcccgtcgtcgacgggaccggcgccgcgctcgccctg
cccggcgacccgacccgcggcggcctcgtccgcctcgaccgcgaccgggcgggcgaggtg
ttctccggtgtcgacgtcgtcttccccgtgctccacggacccttcggcgaggacggcacg
atccaggggctgttcgagatggccgggctgccctacgtcgggtccggcgtgctcgcgagc
gccgcgggcatggacaaggagttcaccaagaagctcctggccgccgaggggctcgcggtc
gggtcgctggtggtgctgcggccgggcacgcagtcgctgaccgcggcgcagcaggaacgc
ctcgggctgccggtgttcgtcaagcccgcgcgcgccgggtcgtcggtcgggatcacccgc
gtcacctcctgggaccggctcgacgaggccgtcgcggccgcccgcgtgcacgaccccaag
gtgctcgtcgaggccgcgatcgtcggtcgtgaggtcgagtgcggcgtcctcgagtacccc
gacggcaccgtgcgggcgagcctgcccgcggagatccggctcgtgtccgggtcggcggag
ttctacgacttcgacgccaagtacctcgacgacgcgtgcgagttcgacatccccgccaag
ctcgacgacgacgtcaccgagcgggtgcgcgaccaggcggtggccgcgttccgggcgctg
gactgccagggcctcgcgcgggtggacttcttcgtcggcgacgacggcgcgcccgtcgtc
aacgaggtcaacacgatgccggggttcaccccgatctcgatgtacccgcggatgtgggcc
gagaccggtgtcgactacccgaccctgctcgccacgctcgtcgacaccgcgctggcccgc
ggcaccgggctgcgctga
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