Pseudonocardia dioxanivorans: Psed_5300
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Entry
Psed_5300 CDS
T01479
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00550
Peptidoglycan biosynthesis
pdx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psed_5300
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdx01002
]
Psed_5300
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Psed_5300
Enzymes [BR:
pdx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Psed_5300
Peptidases and inhibitors [BR:
pdx01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Psed_5300
Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Psed_5300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AEA27434
UniProt:
F4CUW5
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Position
5660610..5661845
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AA seq
411 aa
AA seq
DB search
MSALLALVALTVPATAAAAPGPGQAPAVCRDHAAPPGPPAVEEGPDPVAPLPIPDPPVGG
PALGTCDLALPPGAPALPAGIDAAGWVLADLDSGVVLAARDPHGRQRPASTLKLLTTLVV
LDRLPLDQTVVGDTSDVQVDGSRAGIGPGGSYTVQQLLTGLLLNSGNDTAHALARTLGGV
PRTLDLMQQRAAAMGALDTRPATPSGLDGPGMSTSAYDLALFLRAALRNPTFAELTQLRL
VAFPGFGDRPGFMLSNDDPLLSSYDGALGGKTGFTDAARHTFVGAAQRDGHRLVVALVRG
EQHPVRMVAQASALLDYGFALPAGTPGVGTLVEQAPAPPTAATTVPAAPGSDGAVPSSNP
VGWIVAAVLLLFALAALVGYVVRKARGMRQEPDGFPRDPAAPRARDSAKDS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcgctgctcgcgctcgtcgcgctcaccgtcccggcgacggcggccgccgccccc
ggccccggccaggcgccggcggtctgccgcgaccacgccgccccgcccgggcccccggcc
gtggaggagggcccggacccggtcgcgccgctcccgatccccgacccgcccgtcggcggg
cccgcgctcggcacgtgtgacctcgccctcccgcccggcgccccggcgctgcccgcgggc
atcgacgctgcgggctgggtgctcgccgacctcgacagcggcgtcgtcctcgccgcccgg
gacccgcacggccggcagcggccggcgtcgaccctgaagctcctgacgacgctcgtcgtg
ctcgaccgcctcccgctggaccagacggtcgtcggggacacctcggacgtgcaggtcgac
ggcagccgggcggggatcggtccgggcggcagctacaccgtccagcagctgctgacgggg
ctactgctcaactccggcaacgacaccgcgcacgcactggcccgcacgctcggcggcgtg
cctcggaccctcgacctcatgcagcagcgggcggcggccatgggcgcgctcgacacccga
cccgccaccccgtcgggtctcgacgggccggggatgtcgacgtcggcctacgatctcgcg
ctgttcctgcgggccgcgctgcgcaacccgaccttcgccgagctgacgcagctgcggctc
gtcgcgttccccgggttcggcgaccgtcccggattcatgctgtccaacgacgacccgctg
ctgagctcgtacgacggcgcgctcggcggcaagaccgggttcaccgacgcggcccggcac
acgttcgtcggtgccgcgcagcgtgacggacaccgcctcgtggtagcgctcgtgcgcggc
gagcagcaccctgtgcgcatggtcgcccaggcgagtgcgctgctggactacgggttcgcg
ctgccggccggcacccccggggtggggacgctggtcgagcaggctcccgctcccccgacc
gcggcgacgacggttcccgccgcaccgggctccgacggcgcggtcccgtcgtcgaacccg
gtggggtggatcgtcgcggccgtcctcctgctgttcgcactcgccgcgctcgtggggtac
gtcgtccgcaaggcccgcgggatgcgtcaggaacccgatggcttcccgcgcgacccggcc
gcgccgcgtgccagggattccgcgaaggactcctga
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