Pseudonocardia dioxanivorans: Psed_5369
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Entry
Psed_5369 CDS
T01479
Name
(GenBank) Alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00470
D-Amino acid metabolism
pdx01100
Metabolic pathways
pdx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Psed_5369
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Psed_5369
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Psed_5369
Enzymes [BR:
pdx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Psed_5369
Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Precursor biosynthesis
Racemase
Psed_5369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AEA27503
UniProt:
F4CW85
LinkDB
All DBs
Position
complement(5736321..5737580)
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AA seq
419 aa
AA seq
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MGGGARPDGVVGGCDDAGVAQPSMSDRGPRAELVVDLAAVRHNVGLLSRGAAASGAATMA
VVKSDGYGHGAADVARAALQAGASWLGVCTLDEALALRADGIEAPVLSWLHLPHEDFAPA
VAAGVDLSVSSHGHLDAVLAGARAVDRPARLHLKIDTGLSRNGCPEDDWPDLVDAAAKAA
AAGRCEVVAVWSHLAVADVARHPVTEAQAARFDAAWRVARDRGLTPIRHLANSAATMTRP
DLHYDLVRPGIAVYGLDPLGRPVAESPLRPAMTVRGRVVLVKQVRAGEGVSYGHEFTTPR
DTVLALVPIGYGDGVPRRMNFGGRMRVWLAGRSRPVVGRVCMDQVVVDCGPDGGAEVREG
DVAVLFGPGDDGAPTAQEWADELGTIHYEVVTGVQGRRMTRTVVGREAGPGTEQEGAAW
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggggcgcgcggccggacggggtcgtcggcgggtgcgatgatgcgggcgtggcg
cagccgagtatgtccgatcgcggcccgcgcgcggagctggtcgtcgatctggccgcggtg
cggcacaacgtcgggttgctctcgcggggcgccgcggcgtcgggcgcggcgacgatggcc
gtcgtcaagtccgacgggtacggccacggcgccgccgacgtcgcgcgggcggcgctgcag
gcgggggcgtcgtggctcggggtgtgcaccctggacgaggcgctggcgttgcgcgccgac
gggatcgaggcgccggtcctgtcctggctgcacctgccccacgaggacttcgcccccgcg
gtcgcggcgggtgtggacctgtcggtgtcgtcgcacggccatctcgacgcggtgctcgcc
ggtgcccgcgcggtcgaccggcccgcccggctgcacctcaagatcgacaccgggttgagc
cgcaacggctgccccgaggacgactggcccgacctggtcgatgcggcggcgaaggccgcg
gccgcaggccggtgcgaggtcgtcgcggtctggtcgcacctcgcggtcgccgacgtcgcg
cgtcatcccgtgaccgaggcgcaggcggcccggttcgacgccgcgtggcgggtcgcgcgc
gaccgcggcctcaccccgatccgacacctggccaactccgcggcgacgatgacccgcccc
gacctgcactacgacctcgtgcggcccggcatcgccgtctacggcctcgacccgctcggc
cggcccgtcgccgagagcccgttgcggccggcgatgacggtgcgcggccgggtcgtcctg
gtgaagcaggtccgcgcgggcgagggtgtctcgtacggccacgagttcacgacgccgcgc
gacaccgtgctggcgctggtgccgatcgggtacggcgacggcgtcccgcggcggatgaac
ttcggcggccggatgcgggtgtggctggccggtcggtcgcggcccgtggtgggccgggtg
tgcatggaccaggtcgtggtggactgcgggccggacgggggggccgaggtgcgggagggc
gacgtggcggtgctgttcggcccgggcgacgacggcgcgcccacggcccaggagtgggcc
gacgagctggggacgatccactacgaggtcgtcacgggcgtgcagggccgccggatgacc
cgcacggtcgtcggccgcgaggccgggccggggaccgagcaggagggcgcggcgtggtga
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