Peptoniphilus sp. ING2-D1G: ING2D1G_1001
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Entry
ING2D1G_1001 CDS
T03807
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ped
Peptoniphilus sp. ING2-D1G
Pathway
ped03420
Nucleotide excision repair
ped03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ING2D1G_1001
03430 Mismatch repair
ING2D1G_1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ped03400
]
ING2D1G_1001
Enzymes [BR:
ped01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ING2D1G_1001
DNA repair and recombination proteins [BR:
ped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ING2D1G_1001
MMR (mismatch excision repair)
Other MMR factors
ING2D1G_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
EAD11
Motif
Other DBs
NCBI-ProteinID:
CDZ75141
UniProt:
A0A090HXX1
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All DBs
Position
I:972873..974690
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AA seq
605 aa
AA seq
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MKLSQEQIQAASHLQGPALTLAIPGAGKTTILLHRIINLLKYGVEPNKILTITFSKAQSL
DIAKRFDLLYPNSKIKPEFSTIHSFCYKILLLYSKIRGKTFKLIEEKPSAKYRLILNLYF
EINKINLSEDSLEKIINKISYFKNSMIDPKDSKTKIPGFIEIYEKYENYKEKNNLIDFDD
MIIYALKILKSDNYLLRKIRSKYEYIQLDEGQDTSISQFELIDLISSPKHNLFIVADDDQ
SIYAFRGANPQYLLHLKDKYQNLKFYYLSNNYRSSKNIVSASNLFISKNKNRYNKKISTH
NEYKNPVNIIKVSTNSEQYEFIYENLLQNKNQTHAVIYRNNLSSLSLVEYLERKNVKFNI
RGSKLKFFSHFIVQDILNIISFSQDQKNIDTFSKIYYKIKGYISKKHLDFIKNNSGTNIF
KTLLEYPGLNEFYKNNIFELASDFNKLKRLNIHQQIEFVFYNLNYNKYLRDVANKFNYNY
EELKEFYYQLKFIAKLEKSLESLLGRLSHLEYLISTKSYANSNLSISTIHSVKGLEYDCV
YVIDLTDDIIPGTNSDKDFDEYQEQRRLFYVAMTRARENLYLMYPKTFNGTPKPMSSFLE
EISNM
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcacaagaacaaatacaagcagcatcccacttacagggtcccgctctgact
cttgcgattccgggtgcgggtaaaacaacaattttattacatagaataatcaatcttcta
aaatacggagttgagcctaataaaatacttaccataactttttcaaaggctcaaagctta
gatattgcaaagagatttgatttgttgtacccaaattcaaaaattaaacctgaattttct
actatacactccttttgttataaaattttgctattgtattcaaaaatcagaggcaaaaca
tttaaattaatcgaagaaaaaccttctgcaaaatatagattgattttaaatctatatttt
gaaataaataagataaatctatcagaagacagtttggaaaagataataaataaaatatcc
tatttcaaaaactcgatgattgaccctaaggattcaaagacgaaaattcccggttttatc
gaaatttacgaaaaatatgagaattataaagaaaaaaacaacttaatagattttgatgat
atgataatttatgctctaaaaattcttaaatccgataattatcttctgcgaaaaatacgc
tcaaaatatgaatatattcagctggacgaaggacaagacacttctatatctcaatttgag
ctgattgatttaataagttctcctaaacacaatttatttatagttgcagatgatgatcaa
tccatatatgcttttaggggtgcaaatcctcaatatttattacaccttaaagataaatac
caaaacttgaaattttattatttatctaataactaccgttcatcaaaaaatatagtcagt
gcttctaatttatttatatcgaaaaataaaaatagatataataaaaaaatttcaacgcac
aacgaatataaaaatcctgtaaacataataaaggtaagcacaaattcagaacaatatgag
tttatatacgaaaacttattacaaaataaaaatcaaactcatgccgtaatatacagaaat
aatttaagtagccttagtttagtagaataccttgaaagaaaaaatgtaaaattcaacata
agaggttccaaactcaaatttttcagtcattttatagttcaagatattttaaatattata
tccttttctcaagaccaaaaaaatattgatactttttcaaaaatatattataagataaag
gggtacatttcaaaaaaacatttggattttatcaaaaataattcaggcacaaatatattt
aaaactcttcttgaatatccaggcttaaacgaattttataaaaataatatttttgagttg
gcatcagattttaataaattgaaaaggttaaatatccatcaacaaatcgaatttgtattt
tacaatttaaattacaataaatacttaagagatgttgccaataaattcaattacaattat
gaagaattaaaagagttttattatcagcttaaatttattgcaaaattggaaaaatcttta
gaatctttacttgggagactttcccatcttgaatatctgatttctacaaaatcctatgca
aattcaaatttaagcatttctacaatacattctgtaaagggtttagaatacgactgcgtc
tatgtaatagatttaacggatgatataattcccggaacaaattccgacaaggattttgat
gaatatcaggagcaaagacgccttttttatgttgcgatgacaagggcaagagaaaattta
tacttgatgtatccgaagacctttaacggaacacctaaacccatgagcagttttttagaa
gaaatttcaaatatgtaa
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