Phycodurus eques (leafy seadragon): 133410088
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Entry
133410088 CDS
T09682
Symbol
slit1a
Name
(RefSeq) slit homolog 1a
KO
K06838
slit 1
Organism
pee
Phycodurus eques (leafy seadragon)
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pee00536
]
133410088 (slit1a)
Glycosaminoglycan binding proteins [BR:
pee00536
]
Heparan sulfate / Heparin
Axon guidance molecules
133410088 (slit1a)
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
LRRCT
LRR_1
LRR_9
hEGF
DL-JAG_EGF-like
JAG1-like_EGF2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
133410088
NCBI-ProteinID:
XP_061546822
LinkDB
All DBs
Position
11:complement(12340343..12460066)
Genome browser
AA seq
1485 aa
AA seq
DB search
MPGRGMFFGMGKLELFMWGMMLCALLTGSAGACPALCTCSGTTVDCHGLGLRTMPRNIPR
NTERLELNGNNLTRITKSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLQLDKNHI
GCVEDGAFRALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLAWLAQW
LRQRPTIGLFTQCTAPPELKGLNVAEVQKHEFSCSGHQYSSSPQPCNTGGGSCPAMCTCS
NNIVDCRGKGLTDIPANLPDSMAEIRLEQNGIKVVPPGAFSPYKKLRRIDLSNNQISEIA
PDAFQGLRSLNSLVLYGNKITDLPQGVFDGLYALQLLLLNANKIHCVRANTFQDLQNLSL
LSLYDNKIQTLAKGTFASLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASP
RRLANKRIGQIKSKKFRCSAKEQYFIPGAEDARLNNACNSEPVCPPKCRCESSVVDCSNL
KLTKIPEHIPSSTTELRLNNNDITTLEATGVFKSLTQLKKINLSNNKITEVEDDVFEGAS
SVNELHLTANQIDTVRSEMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQL
TTITPGAFDTLQTLSTLNLLANSFNCDCRLSWLGDWLRSRKIVTGNPRCQRPAFLKEIPL
QDVALPDFRCEEGHEESSCVPRPQCPSECTCLETVVRCSNKHLHMLPKGIPRNVTELYLD
GNQFSVLPKELSSFKFLQLVDLSNNKINSLTNASFANMSQLTTLILSYNSLRCIPKMAFS
GLHSLRLLSLHGNEISELPDGIFGDVASLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPG
IARCAGPRGLEGKLLLTTPAKKFECTGEVDTAVLAKCNPCLSSPCQNQGICHSDPVDIYR
CNCAPGFKGRNCETTLNACVSNPCANGGRCQVNQELEEEGQYSCTCPLGFEGTVCQTNID
DCEDNDCENGATCVDGVNNYTCFCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSSGP
KCVCAPGYVGDDCGVDYDDCQEHRCQNGAQCVDELNGYTCRCQQGYRGQLCEVPPSLLSL
CELADCQNSAPCVERAGRALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANI
TLQVSTAEDNGILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSAETINDGQFHTVE
LVTLDQMVNLSIDGGLPTTMDSFGAVRPLNGEAPLYVGGMPVGVHPGAFRLWQVQNSSSF
HGCIQNLYINNELQDFTKTQMKPGVVPGCEPCKKIYCMHGICQPDGLQGPVCHCRPGWAG
QQCDQPAGNPCQGSKCVHGRCIPLDSQSYRCECSEGYRGALCNQQGELFNPCRRLSCEHG
RCHISDTGDAYCHCESGYTGELCDAESACRGEPMRDFYQVQRGYAICQTTRTVSWVECSG
ACEAGTCCASQRMKRRKYTFECSDGTTFSEEVEKSIKCGCVGCDV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcagagggatgttttttggcatgggcaagctggagctattcatgtggggcatg
atgctgtgcgccctactgacgggaagcgcgggtgcgtgccctgccctgtgtacctgcagc
ggcaccacagtcgactgccatggactggggctcaggaccatgcccaggaatatcccacgc
aacactgagaggctggagctgaatggtaacaatcttacacgcatcaccaagagtgacttc
gctgggctcaaatacatccgagttctgcagctgatggagaatcagattactgtgatcgag
cgtggggcttttgatgacatgaaggagctcgagagacttcagttggataaaaaccacatc
ggctgcgtcgaggacggcgccttcagagctttgcgaggcttggaagttctaaccctgaac
aacaacaacatcagcagcatcccagtttccagcttcaaccacatgcccaaactgcgaacc
ttccgtctccactccaacaatctcaactgtgactgtcatctggcctggttggcccagtgg
ctccgacagcggcctaccattggtctgttcactcagtgcacagcaccgcccgagctcaaa
ggtctcaatgtggccgaggttcagaaacatgaattcagctgctcgggccaccagtattcc
tccagtccacaaccgtgcaacacaggtggaggttcctgtcccgccatgtgtacctgcagc
aacaacatcgtggactgcagagggaaaggtctgactgacatcccggccaacctgccggac
agcatggctgaaatacgtctggagcagaatgggattaaggtagttcctccaggagccttc
tctccctacaagaagctgcgtaggatagacctgagcaacaaccagatctcggagatagct
cctgacgccttccagggtctgcgctccctcaactcgctcgtgctgtatggaaataagatc
accgacctgcctcagggtgtctttgatggcctctatgccctgcaactgcttttgctgaac
gccaacaagattcactgcgtccgtgccaacaccttccaggacctgcagaacctctcgctg
ctgtcgctgtatgacaacaagatccaaactctggccaagggtaccttcgcttcactgcga
gccatacagacccttcacctggcccagaatccattcatttgcgactgtaacttgaagtgg
ctggccgactacctgcgctccaaccccatcgagaccagcggcgcccgctgtgcgagcccc
cgtcggctggccaacaaacgcatcgggcagatcaagagcaagaaattccgctgctccgcc
aaggagcagtacttcatcccaggtgccgaggacgcccggctgaataacgcctgcaacagc
gagccggtgtgtcctcccaagtgccgctgcgagtccagcgttgtggactgctccaacctg
aagctcaccaagatccccgagcacatcccgtcatccaccactgagctgcgcctcaacaac
aatgacatcaccactctggaggccaccggagtgttcaagagccttacccagctaaagaaa
atcaaccttagtaacaacaagatcacagaggttgaggacgacgtgttcgagggcgcctcg
tccgtcaacgagcttcacctcacagccaatcagatcgacacggtccggagcgagatgttc
cgtggcctggagggtctgcgcatgctaatgctcaggaataacaagatcagctgtgtccac
aatgacagcttcacgggcctgcacaacgtgcgtctgctgtctctctacgacaaccagttg
accaccatcacccctggagccttcgataccctgcagaccctctccaccctaaaccttctg
gccaactcgttcaactgcgactgccggctgtcctggctgggagactggctgaggagcagg
aagatagttacgggtaaccctcgctgccagcgtccagccttcctaaaggagatccccctg
caagatgtggcgctgcctgatttccgctgcgaggaaggccacgaggagtcaagctgtgtg
cccagacctcagtgccccagcgagtgcacttgcctggagacagtggttcgctgcagtaac
aagcacctccacatgttgcccaaaggaatccccagaaacgtgacggaactgtatctggat
ggaaaccagttcagtgtgctaccaaaagagctgtcctcctttaaattccttcagctggtg
gacctgagcaacaacaagatcaactctctgaccaacgcgtctttcgccaacatgagccag
ctaaccactctaatcctgagctacaactccttgcggtgcattcctaaaatggccttcagt
ggactgcactccctccgactactgtctctccatggcaacgaaatctcagagcttcctgat
ggcatcttcggcgacgtggcctcactctcccatttagcaatcggtgccaacccgctgtac
tgcgactgccgcctgcgctggctgtctgactgggtcaagaccggatacaaagagcccggt
atcgcccgctgtgctggtccacgtggcctggagggcaaactgctgctcaccacaccggca
aagaagtttgaatgcacgggtgaggtggatacagcagtgctggccaagtgtaacccatgt
ctgtccagcccgtgtcagaaccaaggcatttgtcatagcgacccggtggatatctacagg
tgcaactgtgctccgggattcaagggcaggaactgcgagacgactctgaacgcctgcgtg
agcaacccttgtgccaacggagggcgatgccaagtgaatcaggagttggaggaggaggga
cagtacagctgcacatgcccgctggggttcgagggcaccgtctgccagaccaacattgac
gactgcgaagacaacgactgcgagaacggtgccacctgcgtggacggagtcaacaactac
acatgtttttgtcccccctactacacaggggagatgtgtgaggaaatggaggacgtgtgc
gccccaggacgaagcccctgccaacatcagtctacctgcctcatcacctcctctgggccc
aagtgtgtgtgcgctcctggttatgtgggtgacgactgcggtgtggactacgacgactgc
caggagcatcgctgtcagaatggagcccagtgtgtggacgaactgaacgggtacacgtgc
cggtgtcaacaaggttacagaggtcaattgtgtgaggttcctccttcgctgctgtccctg
tgcgagctggccgactgtcagaacagcgccccttgtgtggagcgggccggccgcgccctc
tgccagtgtcctccggagtttggcgggccgcgctgcgagaagctggtcagcgtcaacttt
gtggacagagactcctacctgctgctctccgacctcaagaactggccgcaggccaacatc
acccttcaggtatccacggcagaggataacggcatcctcttgtacaacggagacaatgat
cacattgcggtggagctgtaccagggtcacgtaaaggtcagctacgaccctggcagccag
cccggccacgccatctacagcgccgagaccatcaacgacggtcagttccacacggtggag
ctcgtcacgttggaccagatggtgaacctgtccatcgacgggggtctccccaccaccatg
gacagcttcggggcggtgcggcccctcaacggagaggctccactatacgtgggggggatg
cccgtgggcgtgcacccgggcgctttccgcctgtggcaggtccagaacagctccagtttc
cacggctgcatccagaacctgtacatcaacaacgagctccaggacttcaccaagacccaa
atgaagcccggcgtggtgccgggctgcgagccgtgcaagaagatctactgcatgcacggc
atctgccagcccgacggcctccaggggcccgtgtgccactgccggccgggttgggccgga
cagcagtgtgaccagcccgccggcaacccctgtcaaggcagcaaatgtgtccacggccgg
tgcataccgctggacagtcaatcgtaccgctgcgagtgtagcgaaggataccgcggtgcg
ctgtgcaaccaacagggagagctgttcaacccctgccgccggctgtcctgcgaacacggc
cgctgccacatctcggacacgggagacgcctactgtcactgtgaaagtggttatactggg
gagctctgtgacgcagagtcggcgtgccggggcgagcccatgcgagacttctaccaggtg
cagcggggctacgccatctgccagacgacgcgcaccgtgtcctgggtggagtgcagcggc
gcgtgcgaggcgggcacctgctgcgccagccagcggatgaagcgtcggaaatacacgttc
gagtgcagcgacggcaccacctttagcgaggaggtggagaagagcatcaagtgcggctgc
gtgggctgcgacgtctag
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