Pedobacter sp. KBS0701: FFJ24_001650
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Entry
FFJ24_001650 CDS
T06361
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
pek
Pedobacter sp. KBS0701
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
TonB_dep_Rec
Motif
Other DBs
NCBI-ProteinID:
QDW28111
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Position
453439..456594
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AA seq
1051 aa
AA seq
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MGNGARSGYKGAKQLLLVMYLTLITSALFVNPAVAQQRRRITGTVADEQKQLLIGATITV
KGTNSKVQTGTNGEFAIEIPADRQILIIAYIGMKTQEVSVAGKNTVNVTMKSNSDQLGDV
VIVGYGVQKKQSVVGAISQTTSEVLERTGGVSSLGAALTGNLPGVITTASTGMPGDEDPQ
ILIRGRSTWNNASPLILVDGVERSINNIDISSVASVSVLKDASATAVFGVKGANGVILIT
TKRGRDGKAEIRAAANTVVKSASKLPGKLDSYDMFQARNRTIEYELALAPGAWSSYLPEA
VMQKYRSPANLEEAERYPNVDWVNTLFRDNAMSYNANLNISGGTPFVKYFSSVDYLDEGD
LFRRFSNDRGYSGGYSFKRLNVRSNLDFQITPSTVFRTNISGSRGVSERPWIDVNPYNTW
TAAYSAAPNLYLPVYSDGTWGYYKPNEQQSLNSVRILSTSGMQTTTTSRITTDFTLDQSL
NSLVKGLSLKGTLSIDNTFIEAGRGIDDRNNGTLSKYIDPETGVVSYSQTKDAATELEWR
ESVRWASRAGDVNDGATYRRMFSQMQINYARTIAQNHNVTAMGLWSRDNTATGSIIPSYR
EDWVFRTTYNYAGKYSFEYNGAYNGSERFAPAYRFDFFSSGGLGWMISEEKFMKPIKFIN
SLKLRGSYGGIGDDGGSPRFAFLTNWAFGGTTPLGTTGEAAENSPYNWYRETSVGNPNVR
WEKVVKKNIALDFGFFGNMISGSVDFFQDDRSDILTSNRAVPSYYGATPPTFNVGKVKSR
GFEIDLRFNKKINNNLTLWSNINYTHARNKVTYADVAGLLPLYAKPIDKQIGQAYSYVSA
GYYNTWDQLYGSTMHNANDQLKIPGNYHLVDYNADGVIDANDNIPYGYSGAPENTYNATI
GFEWKGFSAFAQFYGVNNVTRQVVFGTFSGKNTVAYDEGSYWSKDNINPDGPMPRWETTP
AGFYTADRYFYDASYLRLKNAEIAYTFRQDWVKKAGISSIRVFLNGNNLYVWTKMPDDRE
ANYQSAGGQGWASQGAYPTVKRYNLGANFIF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatggtgcgcgctccggatataagggggcaaagcagttattactcgtgatgtat
ttaacactgattacttccgctctgttcgttaatccagctgtagcccaacaacgacgaagg
ataaccgggacggtagctgatgaacaaaagcagctgctaataggagccactattactgta
aaaggcactaattctaaagtacaaaccggtacgaatggcgaatttgccatagagataccc
gccgacaggcagatacttatcattgcatatataggtatgaagacgcaggaggtgagtgtt
gccggcaaaaacaccgtaaacgtaacaatgaaatctaattccgatcaattgggtgatgta
gtgattgtgggatacggcgttcagaagaaacaaagtgtagttggtgcgatttctcaaaca
accagcgaagtgttggaaagaacaggtggtgtatctagtttaggtgccgcattaactgga
aatttgccaggtgtgattactactgccagcaccggaatgcctggagatgaagatcctcag
attcttattcgcgggcgcagcacctggaacaatgccagtccgcttattttagttgatgga
gttgagagatcgatcaataatatagatatcagctctgtggcttctgtttcagtacttaaa
gatgcatcagcaactgcggtatttggggtaaaaggagcaaacggagtaatcttaatcaca
actaaaagagggcgcgatgggaaggcagaaatcagggcagctgctaatactgttgttaag
tctgcatctaaactgcctggtaagctcgattcttatgatatgttccaggcacgtaaccga
acaatcgaatatgaactggcactcgctccgggggcctggagttcctatcttcccgaagct
gtgatgcaaaaataccgctcgccagccaatcttgaagaagccgagcgttaccccaatgta
gattgggtaaataccctgttcagggataatgcaatgtcttataatgccaatcttaacatc
agcggtggaacaccattcgtaaagtatttttcttctgttgattaccttgacgaaggagat
ttgtttagaaggtttagtaacgatcgtggctatagcggtggctacagtttcaaaagattg
aatgtaagaagtaacttagattttcaaataacgccatcaacggtcttcagaacaaatatc
tcaggttcacgaggcgtatctgagcgtccatggattgatgttaacccttacaatacctgg
actgctgcttactctgcagcgccaaatctctatcttcctgtttattctgatggtacatgg
gggtattataaacctaatgaacaacaaagtttaaactctgtacgaattttatctaccagt
ggtatgcagaccaccacaacttcacgtattacaacagattttaccttagatcaaagctta
aattctcttgttaaaggactgagcctgaaaggaacattatctatcgataatacatttatc
gaagctggccgcggaatcgatgaccgtaataacggaacactgagtaaatacattgatcct
gaaacaggagtagtaagttattcacaaactaaggatgcggcaacggagcttgaatggaga
gaaagtgtaagatgggcaagccgtgcgggtgatgttaatgatggcgcaacttaccgccgg
atgttttcccaaatgcaaatcaattatgcccgaaccattgctcaaaatcataatgtaacg
gctatggggctttggagcagagataatacggctaccggaagtattattccttcttaccgt
gaagactgggttttccgtaccacttataattatgctggtaaatacagtttcgaatataac
ggagcttataacggttctgagcgatttgcacctgcctatcgttttgatttcttttcttcc
ggagggcttggatggatgatctctgaagaaaaatttatgaaaccgatcaaattcatcaat
tcattgaaattacgtggatcgtatggtggaattggtgatgatggtggttctcccaggttt
gccttcctgacaaactgggcatttggaggtactacaccactgggtactactggtgaagct
gcagagaatagtccttacaactggtatagggaaacttcggtaggtaatccaaacgtacgt
tgggaaaaggttgtaaaaaagaatattgcacttgatttcggattttttggaaacatgatc
tctggaagcgtagatttcttccaggacgacaggagcgatatccttaccagcaatcgtgct
gttccaagttactatggtgccacaccacctacgtttaacgttgggaaagtgaaatcaaga
ggatttgaaatagatctgcgttttaacaagaaaatcaacaataaccttacattatggagc
aacattaattatactcatgccaggaacaaagttacctatgctgatgttgccggattgtta
ccgttatacgctaagcctattgataaacagattggacaggcttattcttatgtaagcgct
ggttattacaatacctgggatcagctgtatggaagtaccatgcacaatgccaatgaccaa
ttgaaaataccgggaaactatcatctggtagattacaatgcggatggggtaattgatgca
aatgataacattccttatggttactccggtgctcctgaaaacacctacaatgccactata
ggttttgaatggaaaggatttagtgcatttgctcagttttacggagtgaacaatgttacc
cgccaggttgtattcggaacattttctggaaaaaatacggttgcctatgatgaaggaagt
tattggtcaaaagacaacataaaccctgatggcccgatgccacgttgggaaacaacacct
gcgggtttttacacggcagacaggtacttctacgatgcttcttatctgcgtttaaaaaat
gctgagattgcttatacgtttagacaggactgggttaaaaaagccggaatatcaagtata
cgtgtattcctaaacgggaacaatttatacgtgtggactaagatgcctgatgaccgtgaa
gcaaattaccaaagtgcgggcgggcagggctgggcatcgcaaggtgcatacccaactgta
aagcggtataatctgggtgctaatttcatcttttaa
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