Pelagibacterium flavum: OF122_04080
Help
Entry
OF122_04080 CDS
T08676
Name
(GenBank) endo alpha-1,4 polygalactosaminidase
KO
K01884
cysteinyl-tRNA synthetase, unknown class [EC:
6.1.1.16
]
Organism
pem
Pelagibacterium flavum
Pathway
pem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OF122_04080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pem01007
]
OF122_04080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pem03016
]
OF122_04080
Enzymes [BR:
pem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
OF122_04080
Amino acid related enzymes [BR:
pem01007
]
Aminoacyl-tRNA synthetase
Other
OF122_04080
Transfer RNA biogenesis [BR:
pem03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OF122_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_114
GHL15
Motif
Other DBs
NCBI-ProteinID:
UYQ72953
LinkDB
All DBs
Position
complement(810351..811262)
Genome browser
AA seq
303 aa
AA seq
DB search
MGIRMAGLAAVLTAFPLMLSPQASGAAASALAGVRSWTYQLQHINLHVLAASNYDLLVID
YSRDGTAAGAFSASEIAALKTRPDGSRRFVLSYLSIGEAEDYRYYWQDDWARNRPSWLLG
ENAEWDGNYDIRYWDPAWQAIIFGEPASYLDQIMAAGFDGVYLDRVDAFERGDSQLDIAR
RKSAMVTFVSDLATYARAHNPDFLVVPQNGEELLSAPAYRRVIDGMGKEDLLFGAEQDQQ
RNSLGTLRASLEMIGRLTAEGKPVFLSEYLTSSSDIAQARDNAATLGVLLFIGDRELDDA
HSR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggggatacgaatggccggactggctgccgttctgaccgcatttccgcttatgctctca
ccccaggccagcggcgcggcggcgtcagctcttgccggagtccgatcatggacttaccag
ctccagcacatcaatctgcacgtcctcgccgccagcaactacgatctgctggtcatcgat
tactcgcgcgacggaacggcggccggcgccttttcagcatccgagatcgccgccctcaag
accagacccgacggatcgcgccgctttgtgctctcttatctctcgatcggagaagccgaa
gattaccggtactactggcaggacgattgggcccggaaccgcccgtcatggctgcttggc
gaaaacgccgaatgggacggcaattacgacatccgctattgggaccccgcttggcaggcg
atcatcttcggtgaacccgccagctatctcgaccagatcatggccgccggctttgacggc
gtctatctcgatcgggtcgatgccttcgagcgcggagattcccagctcgacatagcgcgc
cgcaagagcgccatggtgaccttcgtcagcgacctcgccacctacgcccgcgcgcataac
cccgatttccttgtggtaccccagaatggcgaggagctgctcagtgcccctgcctatcgc
cgggtcattgatggcatgggcaaggaagacctgctgttcggcgccgaacaggaccagcag
cgcaatagcctcgggacgctgcgcgcctcgctcgagatgatcggccggctgaccgccgag
ggcaaaccggtctttttaagcgaatatctcacctcgtcatccgacattgcccaggcgcgc
gataacgcggcaacgcttggggtcttgctgttcatcggcgacagggagctcgatgatgct
cactctcgctga
DBGET
integrated database retrieval system
