Pseudomonas entomophila: PSEEN1078
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Entry
PSEEN1078 CDS
T00362
Symbol
cafA
Name
(GenBank) ibonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pen
Pseudomonas entomophila
Brite
KEGG Orthology (KO) [BR:
pen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pen03019
]
PSEEN1078 (cafA)
03009 Ribosome biogenesis [BR:
pen03009
]
PSEEN1078 (cafA)
Messenger RNA biogenesis [BR:
pen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSEEN1078 (cafA)
Ribosome biogenesis [BR:
pen03009
]
Prokaryotic type
rRNA processing factors
PSEEN1078 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
CAK13978
UniProt:
Q1IEC7
LinkDB
All DBs
Position
1130249..1131706
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLERAAFIHASEISQREGSAVETITALVHEGQALVVQVTKDPIGTKGARLTTQLSIPSRY
LVYMPRSSHVGISLKIEEEAERERLKQVVNDCMAQEDMKDAGGFILRTAAEGARAEDILQ
DIRYLRRLWEQIGAQISTCGAPTVIYEDLGLALRTLRDLVNPKIEKIRIDSRETFQKTTQ
FVAELMPEIADRLEHYPGERPIFDLYGVEDEIQRALERKVPLKSGGYLVVDPAEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNIGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCAACQGRGKLKTPETICYEI
FREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELEAFIGRTIRFQVESMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagagatcctgatcaacatcaccccgatggaatcacgcgtggcggtggtggag
aacggcgtcctgcaggaagtgcacgtcgagcggacccagcgccgcggcatcgtcggcaat
atctacaagggcaaggtggtgcgggtgttgccgggcatgcaggcggccttcgtcgacatc
ggcctggaacgcgcggcgttcatccacgcctcggagatctcccagcgcgagggctcggcg
gtggagaccatcaccgcgctggtccacgagggccaggcgctggtggtgcaggtgaccaag
gacccgatcggtaccaagggcgcgcgcctgaccacccagctgtcgatcccctcgcgttac
ctggtgtacatgccacgcagcagccatgtcgggatttcgctgaagatcgaggaagaagcc
gagcgcgaacgcctcaagcaagtggtcaacgactgcatggcccaggaggacatgaaggat
gccggtggcttcatcctgcgcaccgccgccgaaggcgcccgcgctgaagacattctccag
gacatccgctacctgcgccgcctgtgggaacagattggcgcgcagatcagcacctgtggc
gcgcccaccgtgatctacgaggacctcggcctggcgcttcgcacgctgcgcgacctggtc
aacccgaagatcgagaagattcgcatcgattcgcgggaaactttccagaagaccacgcaa
ttcgtcgccgaactgatgcccgagatcgctgaccgccttgagcattatcccggcgagcgt
ccgatcttcgacctttacggggtcgaggacgagatccagcgggccctggagcgcaaggtg
ccgctcaagtccggcggctacctggtggtcgacccggccgaggcgatgaccaccatcgac
gtcaacaccggtgcgttcgtcggccatcgcaatctcgaagagaccattttcaagaccaac
ctcgaggcggccaccgcgatcgcccgtcaattgcgcctgcgcaacatcggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcaccagcgccaggtcctgcgtactctg
gagaagcaactcgagcgcgaccacgccaagaccaacatcatcggcatcaccgagctgggc
ctggtgcagatgacccgcaagcgcacccgcgaaagccttgagcaggttctgtgcgaaccg
tgtgccgcctgccaggggcggggcaagctgaagacccccgagacaatctgttacgaaatc
ttccgtgagatcctgcgcgaggcccgcgcctaccaggccgagggctaccgggtactggcc
aaccagaaggtggtcgaccgtctgctcgacgaagagtcgggcaatgtcgccgaactggaa
gcgttcatcgggcggaccattcgcttccaggtcgagtcgatgtactcccaggaacagtac
gatgtggtgctgctctga
DBGET
integrated database retrieval system
