Pedobacter sp. PACM 27299: AQ505_06170
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Entry
AQ505_06170 CDS
T04140
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pep
Pedobacter sp. PACM 27299
Pathway
pep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AQ505_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pep03400
]
AQ505_06170
DNA repair and recombination proteins [BR:
pep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AQ505_06170
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AQ505_06170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
NapD
VWA_N2
Motif
Other DBs
NCBI-ProteinID:
ALL05113
UniProt:
A0A0P0NDY0
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All DBs
Position
1442827..1443444
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AA seq
205 aa
AA seq
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MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVSNFGNSIIKLRQEIKHCAV
CHNISDHVHCEICTANKRDKEIICVVEDTRDVMAVENTSQYFGVYHVLGGLISPMDGIGP
ADLFIDSLVQRVATSPVKEVILALSATMEGDTTLFYLYKRLKDFQIPITAIARGIAFGGE
LEYADEITLGRSIITRVPYENSLIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcatccaagcttctcgaagacgctgtcaacgaattttctaagttaccggga
gtcggacaaaagacggcattacgcttggtattacacttgttaaacaaggaacaggaagag
gtttctaacttcggcaattccattattaaactgagacaagagatcaagcattgtgcggtt
tgccataacatttcagatcatgtacactgtgaaatctgtaccgctaataaacgtgataaa
gaaattatttgcgtggtagaagataccagagacgtgatggctgtagaaaatacctcacaa
tattttggcgtttaccatgtgctgggaggtctaatctctccaatggatggcatcggtcct
gctgatctttttattgattccctggtgcagcgtgtggcgaccagtcctgttaaagaagtg
attttagcactgagtgctaccatggaaggagatactactcttttttacctttataaacgt
cttaaagattttcaaatcccgattaccgctattgcccgaggaatcgcctttggtggtgaa
ctggaatatgcagacgaaatcaccctggggcgctctatcattacaagggtgccttatgaa
aactcattaatcaaataa
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