Populus euphratica (Euphrates poplar): 105108284
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Entry
105108284 CDS
T05872
Name
(RefSeq) histone deacetylase 19-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03082
ATP-dependent chromatin remodeling
peu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105108284
03083 Polycomb repressive complex
105108284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peu03036
]
105108284
Enzymes [BR:
peu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105108284
Chromosome and associated proteins [BR:
peu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105108284
HDAC complexes
Sin3A-HDAC complex
105108284
BRAF-HDAC complex
105108284
REST complex
105108284
SHIP complex
105108284
MiDAC complex
105108284
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105108284
Heterochromatin formation proteins
Other heterochromatin formation proteins
105108284
Chromatin remodeling factors
NuRD complex
105108284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105108284
NCBI-ProteinID:
XP_011000838
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDTGGNSLQSAAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHM
QVLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQ
TYAGGSVGGAVKLNHNLCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKVHERVL
YVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGFSKGKYYSLNVPLDDG
IDDESYHFLFKPLIAKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF
NVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNME
NKNSHQLLEEIRSKLLDNLSKLQHAPSVQFQERPPDTELLEIYQAEEDQDDADERWDPDS
DMDVDDERKPLPSRVKREIVEAEPKELEGQKGSSEHARGFDTAIDENASGKALDAGPLQI
DEPGVRVEQENVNKHSDPLYSK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacactggtggcaactctctccaatccgctgctcctgacggggttaagagaaaggtt
tgctatttctacgatccagaagtcggcaattactattatggccaaggtcaccccatgaag
ccccaccgcattcgaatgacccatgctttgcttgcccactatggtttgcttcagcacatg
caggtcctcaagccctttcctgctcgtgaccgcgatctttgccgcttccatgctgatgat
tatgtctctttcctccgcagcatcacccctgagacccagcaggaccagctcaggcagctg
aagcgctttaatgttggtgaagattgtcctgtctttgatggcctctactccttctgccag
acttacgctggtggctctgttgggggtgccgtcaagttaaatcacaacctctgtgacatt
gctgtcaattgggctggtggcctccatcatgctaagaagtgtgaagcttctggtttttgc
tatgttaatgacatcgtgcttgcaatattggagcttcttaaagtgcatgagcgtgttctg
tatgtggatattgacattcaccatggggatggtgtggaagaagcattttacaccactgat
agagtcatgactgtttcattccataaatttggggattactttcccggcacaggagatata
cgtgacattggattttcaaaaggaaaatactactctctcaatgttccattggatgatgga
attgacgatgagagctatcatttcttgtttaaaccactaattgcaaaagtaatggaagtt
tttaaaccgggtgctgtggttctccaatgtggtgctgactcgttatctggggatagatta
ggatgcttcaatctttctatcaagggccatgcagagtgtgttaaatttatgagatctttc
aatgtgccattattgctattgggtggtggtggctacaccattcgaaatgttgctcgctgc
tggtgctacgagactggagttgcacttggaattgaagttgatgataagatgccgcagcat
gagtattatgagtactttggtccagattatactcttcatgttgcccctagcaacatggaa
aataagaattcccaccagttacttgaggaaatacggtctaagctccttgataatctttca
aagcttcagcatgcaccgagtgtccaatttcaggaaagaccacctgacactgagcttctg
gagatttatcaggcagaagaagatcaggatgatgcagatgagagatgggatccagattct
gatatggatgttgatgatgaacgaaagccattaccaagcagagtgaagagagaaatagtt
gaagctgagccaaaggagttggagggtcagaaaggaagttctgagcatgctagaggcttt
gatacagcaatagatgaaaatgcaagtggaaaggctttggatgctggtcctttgcaaatt
gatgagccaggtgtgagagttgaacaggaaaatgtgaacaagcattctgatccgttgtac
tccaagtag
DBGET
integrated database retrieval system