Populus euphratica (Euphrates poplar): 105118677
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Entry
105118677 CDS
T05872
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
peu
Populus euphratica (Euphrates poplar)
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
peu03041
]
105118677
Spliceosome [BR:
peu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105118677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
Suf
TPR_19
TPR_12
TPR_MalT
NRDE-2
TPR_10
Motif
Other DBs
NCBI-GeneID:
105118677
NCBI-ProteinID:
XP_011014970
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MGDSETVVTEPSAVMDYTAAGYTSTGYADAISNVVPGPGIYTAECTGNFTASFVAAQAAH
TGNAQGTDSTSVVLHGHVEATHGTEAVVGMDSTTNNAAVAENASIAPPQASGYDSAVNGN
IGTEAGVVVSVENGNAGEVVGGADAVQQFVDRSVPEMSAEEDRLWSIVKANSLDFDAWTA
LIDETEKVAGDKILKIQKVYDAFLGEFPLCYGYWKKYADHEARLGFMDKFVEVYEQAVLG
VTYSVDIWLHYCMSAISMYGDPETIRRLFERGLAYVGTDYLSYPLWDKYIEYEEVHAEWG
RVAMIYTRILEIPNRKLDDYFNRFKAFAASRPLSELRTVEEAAAAAAAARTLLEDGGQAD
EGEVHPDAAELPSKPVSSGLGEAEELEKYIAVREEIYKKAKEFDSKISDFENAIRRPYFH
VRPLNVAELENWHNYLDMIEREDDFNKVVKLYERCIIACANYTEYWIRYVLCMEACGNMD
LANNALARATQVFVKRQPEIHLFAARFKEQNGDIPGARAAYRVVHAEIAPGLLEAITKHA
NMEHRLGNLEDAFSLYEQAIAIEKGKEHSQVLPVLYAQYARFIYLASKNVEKAREVLVEA
LENAQFSKPLLEALIHLETFLPPPKRIDYIDSLVDNFILTSSDSVNAASACEREELSCIF
LEFLGVVGDAQSIKKAADRHAKFFLPHSSKSELKKRHAEDYLSSDREKIVKPYSDATLSA
QSLMGAYASAQNQWTAGYGLQPQAWPPATQVQTQQWTPGYNQQAAYGGYGGSYTSPQVPT
SVAQGAAYGAYPPTYPAQAFPQQSYVQPAAAAAAAALTPAQQPASVPQPYYGSYY
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagtgagacagtagtaactgaaccatctgcagttatggattatacagcggct
ggctatacttctactggctatgctgatgccatttcaaatgttgttcctggtcctggcatt
tacactgcagagtgtactgggaatttcactgcttcttttgttgcagcacaggcagctcat
actggaaatgcacagggtacagattctacttctgttgtgctacatggtcatgtagaggca
acgcatgggacagaggcagttgttggaatggacagtactactaacaatgcagctgtggca
gaaaatgcatctattgcgccacctcaagcttctgggtatgattcggctgtaaatggaaac
attggtactgaagctggagttgtggtatcagttgagaatggaaatgctggagaggttgtg
ggtggagctgatgctgtgcaacagttcgtggatcgttctgtgccagaaatgtcagctgaa
gaagaccggctgtggagcattgtgaaggctaattctttggattttgatgcatggactgcc
ttgatagatgagacggagaaggtggctggggacaagatattgaaaattcaaaaagtgtat
gatgcttttttgggtgaatttcctttgtgttatggatattggaagaagtatgcagatcat
gaagcacgccttggttttatggacaaatttgtggaggtctatgaacaggctgttctcggg
gtcacgtactcggtggacatttggttgcactattgcatgtctgccatatccatgtatgga
gatccagagaccattagaaggctttttgagcgaggattagcttatgttggaacagattat
ctgtcttaccccctttgggacaagtacatcgaatatgaagaggtgcatgcagagtggggc
cgtgttgccatgatttatacacggatattagagattcctaacagaaagctggatgattat
ttcaatagatttaaggcttttgctgcaagtcgacctttatcagaattaaggaccgttgag
gaagcagctgctgctgctgctgcagcacgtacacttctggaggatggtggccaagcagac
gagggagaggtccatcctgatgcagctgaactgccttctaaacctgtaagttctggctta
ggagaagcagaggagttggagaagtatatcgccgttagagaagagatatataagaaagct
aaagagtttgattctaagatctctgactttgaaaatgctattaggaggccctactttcat
gtgcggccccttaatgtcgcagagcttgaaaattggcataactatttggatatgatagaa
agagaggatgacttcaataaggtggtcaagctatatgaaagatgcataatagcatgtgcc
aattataccgaatattggatacgctatgtcttgtgcatggaagcctgtgggaatatggat
cttgcaaataatgctctcgctcgtgcaactcaagtatttgtcaagagacaaccagagatt
cacctttttgcggcgcgcttcaaagagcaaaatggggatatacctggtgctcgagctgca
taccgagttgtgcatgctgaaattgcccctggtcttcttgaagcaatcactaagcatgca
aacatggagcatcggttggggaatcttgaagatgccttctccttgtatgaacaggctata
gccattgaaaagggaaaagagcattcacaagtgctgcctgtattgtatgcacaatatgcc
cggttcatatatttggcatcaaaaaatgtagagaaagccagagaggttctagtcgaagca
cttgagaatgcccaattttcaaagccacttctcgaggccctgatacatctcgagacattc
ctgccaccgccgaaacgaatcgattatattgattcgttggttgataacttcattttgacc
agctcggacagtgtcaatgctgccagtgcttgtgagagggaagagctgtcttgcattttc
ttggagtttttaggtgtcgttggagatgctcaatctataaagaaggctgctgatcggcat
gccaagttcttcttaccccacagtagcaagtcagaattgaaaaagcgccatgcagaggat
tacctttcttcagatagggaaaaaatagtgaaaccctattctgatgccaccttgtctgca
cagtctctgatgggggcatatgcaagtgcacaaaatcaatggacagctggttatggctta
cagcctcaagcctggccaccagccacacaagtacagacgcaacagtggactcccggctat
aatcaacaagctgcatatggtggttatggaggcagctatactagtcctcaagttcctaca
tcagttgcacaaggggctgcttatggtgcctatcctcctacctatcctgcccaggctttc
ccacaacagagttacgtgcagccagcagcagcagcagcagcagcagcattgactccagcg
cagcagccagcctctgttccacaaccttactatgggagttactactga
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