Populus euphratica (Euphrates poplar): 105122793
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Entry
105122793 CDS
T05872
Name
(RefSeq) flowering time control protein FY-like isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
peu
Populus euphratica (Euphrates poplar)
Pathway
peu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
peu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105122793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peu03019
]
105122793
Messenger RNA biogenesis [BR:
peu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105122793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WD40_like
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
105122793
NCBI-ProteinID:
XP_011020385
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MIYGDPQQHQHQQPQHQHQQPQQHHQHRQPQHQHQQHIQQQPPLGGDFHRGQPPPMMRQS
SASSATLNPLDYHHHPQAAPVPPPKYEASHGDGYGGKRMRKLTQRRAVDYTSTVVRYIQT
RMWQWDLRDRTVLQHTPAAAIDMLPPVAYSDNPSTSFATKFVHTSLNKNRCSINRVLWTP
NGKRLITGSQSGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGSIKYWQ
SNMNNVKVNKSAHKESVRGLSFCRTDLKFCSCSDDTTVKVWDFARCHEERSLTGHGWDVK
SVDWHPTKSLLVSGGKDNLVKLWDAKSGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQ
IIKLYDLRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQAEVS
SAHDNSVWDLSWHPIGYLLCSGSNDHTTKFWCRNRPGDTARDKFNMGQNQGYGEQNPALG
GRFPGNFHVPEPPTTPGPFAPGLTRNEGTIPGVGAAMPLSITSLDASQGEQRQPLLSMPF
GVPPLPPGPHPSLHAANQQQGYQQSPQQQPLPQHMPPLPMPPPNMQQLLPPSHVPLLSHP
HLPRPPQMPPCGMPSPIPSSMPGSLPTSMPGPMVMQGTMSQMVPLLPQGHFMGMNPMHSG
SLPTSAAPPVGGGFPNGLPNMQGPSNATGGQMYPQGGPFNHPQGGQMPMMPGFNPYQSGN
QSGMPPPQPSGPPPHSQTPQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatttacggtgatcctcaacaacaccagcaccagcagccacagcaccagcaccagcag
ccacaacaacaccaccagcaccggcagccacaacaccagcaccaacaacatatccaacag
caaccgcctcttggtggtgattttcatagagggcagccaccgccaatgatgcgacagtcc
tccgcttcatcagccactcttaacccgcttgattaccaccaccatccgcaggccgcccca
gttcctcctcctaaatacgaagctagtcatggtgatggttacggtggaaaaaggatgagg
aagcttacgcagaggagagcagttgattatacaagcacggttgttaggtatattcagact
cgtatgtggcagtgggacttgagggacaggacagtattgcaacataccccagcagctgct
atcgatatgttgcctccagttgcctattctgataatccatcaacaagctttgccacaaag
tttgttcatacatctctaaacaaaaaccgttgttcgataaatcgggttttgtggactcca
aatgggaaacgtctaatcacaggttctcaaagtggggaattcaccctttggaatggacag
tcatttaattttgaaatgattcttcaggctcatgatcaagcaatcaggtctatggtatgg
agccacaatgacaattggatggtctctggtgatgatggtggttcaattaagtattggcag
agcaacatgaataatgttaaggtcaataaatctgctcataaagaatcagtgcgtggctta
agtttctgtaggacagatttgaagttctgttcatgctccgatgatactactgttaaagtt
tgggactttgctcggtgccatgaagagcgttcattaacaggccatggttgggatgtgaag
agtgttgattggcaccctacaaaatctcttctggtctcaggtgggaaagacaacctagta
aaactctgggatgctaaatctggaagagagctttgctcatttcatggccacaaaaatact
gttctttgtgtcaaatggaaccaaaatggtaactgggtgctgactgcttcaaaagatcaa
atcatcaagctttatgatttaagggcaatgaaggagcttgaatctttccgtggacatcgg
aaggacgtgactgcattggcttggcatccatttcatgaagagtactttgttagcgggagt
tatgacggatccattttccattggcttgtggggcatgaaaccccccaggctgaagtttcc
agtgctcatgataatagtgtttgggatctttcatggcatcctattggatatcttctttgc
agtggtagcaatgatcacacaacaaagttttggtgtcgaaataggccaggagacactgcc
cgtgataaatttaacatgggtcaaaaccaaggttatggtgagcaaaatcctgcccttggt
ggccgcttccctggcaatttccatgtacctgaaccaccgacaactccaggaccatttgct
cctggactgactcgaaatgaaggaactattccaggtgttggagctgcaatgccactatca
attacatcgcttgatgcatcgcagggagagcagaggcagcctcttctttctatgcccttt
ggagtgcctcctcttcctcctggtccacatccgtcacttcatgcagccaatcagcagcag
ggatatcagcaaagtcctcagcagcagccactccctcagcacatgcctcctttgcctatg
ccacctccaaatatgcaacagctactgcctccatcccatgtacccctgctctctcatccc
catctacctcgccctcctcaaatgcccccttgtggcatgccttcaccaatcccatcttca
atgcccggatctttgcctacatcaatgcctggtccaatggtgatgcaagggacgatgagt
cagatggtacctctgttgccacagggccattttatgggcatgaatccaatgcactcagga
tccttgcccacaagtgctgcccctccagttggcgggggctttccaaatggcctgcccaat
atgcagggcccatcaaatgccacaggggggcaaatgtatccacagggtggtccattcaac
catcctcaaggtggacagatgccaatgatgcctgggtttaatccctaccagtctggaaac
caatctggtatgcctccaccacaaccatctggtccaccaccacattcgcagacacctcag
tag
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integrated database retrieval system
