Populus euphratica (Euphrates poplar): 105133042
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Entry
105133042 CDS
T05872
Name
(RefSeq) DNA ligase 1 isoform X1
Organism
peu
Populus euphratica (Euphrates poplar)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
UBA_4
Motif
Other DBs
NCBI-GeneID:
105133042
NCBI-ProteinID:
XP_011035138
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MAFQSDHQTPQSINSQTLYYKSLTSLSLQIPPTPPSSLSLPPSLPPSKLIPKTRFLIDGF
RFSSPSVTAYFLSHFHSDHYTGLSSHWSQGIIFCSPVTASLVTSILNVPECFVFSLPLNR
AVDIDGVEVSLVDANHCPGAVQFLLKVPICKNLENFELYVHTGDFRYSCEMKDDVFLRGF
VGCNTVFLDTTYCNPKFVFPLQEESVDYVVSAIEKIGGEGFSGGLEKRVLFLVATYVVGK
EKILVEIARRCNRKVYVDERKMEVLRVLGYGESGVFTEDENESDVHVVGWNVLGETWPYF
RPNFVKMKEIMVERGYNKVVGFVPTGWTYEVKRNKFAVRSKDSCEIHLVPYSEHSNYNEL
REYVKFLRPKRVIPTVGVDVEKLDSKHAAKMQKHFAGLVDEMANKKEFLMGFLRGSSEND
EKVEMDAVSGLNEGLTQEKELVQSVEMRAHENNDTVACLNSSSTLQESPTHNLSMLNDEE
RDKLAHELSDCLPRWVTRDQMLDLISTHGRNIVEAVSSFYEREMEFHDQLISCRVTVSSS
ETIPLYDSESPSQPVSINTDSRSMGFMSSQNYKAPSKNPKLKGGNSPGKRKRSVGNKPGK
KSKINSKLESGGSKQSTITKFFNKVLPDASQFSVVASISEQCPGDESLLQNDDVTESYRE
EVDQFIQIIDGNESTRSYAATILKKTEGDINKALDMHYGNPKGNLGKSMEALVVSGNMVE
YQCETGSSSAREKELFGEIENMVDLSVQGSLIKNVDATLVSLPTEKYNPIEHACWNGGQP
APYIHLARTFDLVEAEKGKIKATSLLCNMFRSLLALSPEDVLPAAYLCTNKIAADHENVE
LNIGGTLVTSALEEACGTNRSKIREMYNSMGDLGDVAQACRQTQTLLVPPPPLLIKDVFS
ALQKISLQTGSGSTGRKKSLIVNLMRSCRENEMKFIVRTLVRNLRIGAMMRTILPALAQA
VALNSFSSDECKAENVKERLQYISTAVVEAYNILPTLDLVVPSLINEGVGFSSSTLSMVA
GIPLKPMLAKITNGVAQVLKLFENKAFTCEYKYCVCEENLVVTSKCVLALYAYDSGDSGY
DGQRAQIHKMPNGTVRIYSRNGDETTSRFPDLIKIIEESCKPAAVTFIVDAEVVAVDRKN
GCKLMSFQELSSRERGSKDSSIAVNKIKVDICVFVFDIMFANGEQLLELPLRQRRRYLKD
LFCDERLGCFEYAKEMTVEAQDACLTNDSTLTKMKSFLEDALQSSCEGIMVKSLDMDAGY
CPSKRTDAWLKVKKDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEFQSV
CRVMSGFSDAFYIEMKEFFSGDRILAKKPPYYRTLEAPDMWFSPEVVWEIRGADFTISPV
HQAAVGLVHQSRGISIRFPRFIHSISDRNPEECSTAADIAEMFNSQTRKMDVTAER
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcctttcaatccgatcaccaaaccccacagtccataaactcgcaaaccctatactac
aaatccctcacttcactttccctccaaatccctccaaccccaccatcctccctctctctc
cctccttctctccctccttcaaaactcatccccaaaacccgtttcctcatcgacggattc
cgcttttcctccccttctgtcaccgcttacttcctctcccacttccattctgaccattac
actggtctttcctctcattggtctcaaggtatcattttttgttccccagtcactgcctct
cttgttactagtatccttaatgtccctgaatgttttgtcttttcgcttcctctgaatcgt
gctgttgatattgatggtgttgaagttagtttagttgatgctaatcactgtcctggcgct
gttcagttcttgttgaaagtgcccatttgtaagaatttagagaattttgagttgtatgtt
catactggtgattttaggtactcttgtgagatgaaagatgatgtttttttgagaggtttt
gtggggtgtaatacggtttttttggatactacttattgtaatccgaaatttgtctttcct
ttacaagaagagtcggttgattatgttgttagtgcgattgagaagataggaggagagggg
tttagtgggggtttggagaagagggttctgttcctcgtggctacttatgtggtggggaaa
gagaagattttggttgagattgcacggaggtgtaataggaaggtctatgtggatgagagg
aaaatggaggttttgagggttttggggtacggggagagtggggtgtttacagaggatgag
aatgagagtgatgtgcatgttgttggctggaatgtcttgggggaaacttggccttatttt
cggccgaattttgtgaaaatgaaggaaattatggtggaaagaggttacaataaggttgtg
gggtttgtgccaactgggtggacttacgaagtgaaacgtaataaatttgcagtgagatca
aaggattcatgtgagattcatcttgtgccatatagtgagcattcaaattacaatgaactc
agggagtatgtgaagtttttgagacctaaacgtgtcattcctactgttggtgtggatgtt
gaaaaactcgatagtaaacatgctgctaaaatgcagaagcattttgctgggttagttgac
gagatggctaataagaaggaatttttaatgggttttcttcgtgggtcgtctgagaatgat
gagaaggttgaaatggatgctgtctcaggcttgaacgaggggctgacacaggagaaagag
ttagtgcagtcagttgaaatgagagcccatgagaataatgacactgttgcttgtctcaac
tcctcatctacactgcaagaatctcctacacacaatttaagcatgctaaatgatgaggaa
agagataaactcgctcatgaattgagtgattgtttgcccaggtgggttacccgagaccaa
atgttagatttaatcagcactcatgggaggaatattgttgaagcagtttctagcttttat
gaacgtgaaatggaattccatgatcaattaatttcttgtagagtaactgtttcttcatct
gagacgattccattatatgactctgaatcaccttcacaaccagtttctattaatactgat
agtcgaagtatgggttttatgtcaagccaaaactacaaggcacctagcaagaatcctaaa
ctaaagggtggtaattctcctggaaaaaggaaaaggagcgttggcaataagcctggcaag
aaatcaaaaattaattcaaagctggaatctggcggttcgaagcaatccaccattactaag
tttttcaataaagttttgcctgatgcttctcaatttagcgtggttgcatctatatctgag
caatgccctggagacgaaagtttgttgcaaaatgatgatgttacggagtcatacagggag
gaggtagatcagtttattcagataattgatggcaatgagtcaacaagaagttatgctgcc
accatcctcaagaagacagaaggagatattaacaaggctctggacatgcattatggtaat
cccaagggtaaccttggcaagagtatggaggctttggtggtttctggcaatatggttgag
tatcagtgcgaaactggctcctcttctgccagggagaaagaattgtttggagaaatagaa
aatatggttgatctatccgttcagggatcattaataaaaaacgtggatgcaactcttgta
tcactaccaacagaaaaatataatcccatagagcatgcatgctggaatggtggacaacct
gcaccatatatccatcttgcacgtacttttgacctggtcgaggcagaaaaaggaaagatc
aaagctacttcattattgtgcaatatgtttagaagtttgctggcattgtctcctgaggat
gtgttgcctgctgcctatctgtgcaccaataagattgctgctgaccacgaaaatgtggaa
ctaaacataggtggaaccttggtcacatcggctttggaagaggcatgtggaacaaaccgg
tctaaaataagggaaatgtacaatagtatgggggatcttggtgatgttgctcaagcatgc
cgacaaacacagacattactggttcctccccctccccttcttattaaagatgtattttct
gcgctgcagaagataagtttacaaacaggtagcggaagtactggtcgaaagaagagcctc
attgtgaatctcatgcgttcttgtagggagaatgagatgaagtttattgtcagaactttg
gtaaggaatttacggattggagcaatgatgagaactatcctacctgctttagctcaagct
gttgctttgaattccttttcttctgatgaatgtaaagctgagaatgtgaaggagagactt
cagtacatttccacagcagtggttgaagcttataacatccttcctactctggatttggtt
gttccttcactcataaatgaaggcgttggattttcatcgtcaactttatcaatggttgct
gggatacctcttaaaccaatgcttgcaaaaattacaaatggagttgctcaagtactgaag
ctctttgaaaataaagcttttacatgtgaatacaagtactgtgtttgtgaagaaaaccta
gtagtcacatcaaagtgcgtactagcactttatgcttacgacagtggagattccggatac
gatggtcagcgtgcccaaattcacaaaatgccaaatggcactgtacgtatctattcacga
aatggggatgaaacaacttctaggtttcctgatttgatcaagataattgaggaatcttgt
aaacctgctgcagtgacttttatagtggatgcagaggtagttgcagttgatagaaagaat
ggctgcaagctcatgtcctttcaagagctatcttcaagggagagagggagcaaagattct
tccattgctgtgaataagataaaggttgatatatgcgtgtttgtctttgatatcatgttt
gctaatggagaacagctgttggagcttcctctccgccaaaggcgacgatacttgaaagac
ttgttttgtgatgagagattaggttgttttgaatatgcgaaggagatgacggttgaagca
caggatgcttgtttgaccaatgattcaactttgaccaagatgaaatctttccttgaagat
gctttgcagtcctcgtgtgaagggattatggtgaaatctctagatatggatgctggatac
tgtccatcaaaacggactgatgcatggttaaaggtcaagaaggattatgttgaaggactc
aatgattctcttgatttagtcccgattggtgcttggcatggaaatgggagaaaagcagga
tggtatagtccattcctcatggcatgttacaaccctgagactgaggaattccaaagtgtg
tgccgtgtcatgtctgggttctcagatgctttttatatagagatgaaagaattcttctct
ggagataggatcttggccaaaaagccaccatactatcgaactctggaggcgccggatatg
tggttctctccagaagttgtttgggaaataagaggtgctgactttacaatttcacccgtt
caccaggctgctgttggtttagttcatcaatctcgtggcatctcaatcagatttccaaga
tttattcactccatatcggatagaaatccagaggaatgtagcacagcagcagatatagct
gaaatgtttaattctcaaacaaggaagatggacgtgacagctgaaagatga
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