Pedobacter endophyticus: IZT61_20860
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Entry
IZT61_20860 CDS
T07452
Symbol
recR
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pex
Pedobacter endophyticus
Pathway
pex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IZT61_20860 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pex03400
]
IZT61_20860 (recR)
DNA repair and recombination proteins [BR:
pex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IZT61_20860 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IZT61_20860 (recR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QPH39460
UniProt:
A0A7S9KZ21
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All DBs
Position
5122078..5122695
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AA seq
205 aa
AA seq
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MNFSSKLLEDAVNEFSKLPGVGQKTALRLVLHLLNKEQEEVNQFGNTLIKLKKEIKNCSI
CYNISDHPICEICTSHKRDKETICVVEDTRDVMAIENTGQYFGVYHVLGGLISPMDGVGP
ADLFIDGLVQRVATGNIKEVILALSPNMEGDTTLFYLYKRLKDFNVAVTTIARGIAFGGE
LEYTDEITLGRSIVTRVPYETAMMK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcatccaagctgcttgaagatgcagtaaacgaattctcaaaattgccgggt
gtaggccaaaaaaccgctttaaggttggttttacacctcttaaataaagagcaggaagaa
gttaaccagtttggaaatactttgattaaactaaaaaaggaaatcaaaaactgtagcatt
tgttacaatatctccgatcacccgatttgcgaaatctgtacttcgcataaacgtgataaa
gaaaccatttgtgtggttgaagatacacgcgatgtaatggccattgaaaatacaggtcaa
tattttggcgtttaccacgttctgggtggcttaatttcgccgatggatggggtagggccg
gccgatttatttatcgacggtttggtgcaacgggttgcgacagggaatataaaagaagta
attttagccctgagcccaaatatggagggcgatactacgctgttctatctttataaaagg
ttaaaggattttaatgttgcagtaactacaattgcccgtggcattgcctttggcggcgag
ttagaatataccgatgaaattacactcggtcgctcgattgttacccgcgtaccttacgaa
accgcaatgatgaaataa
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