Pseudomonas eucalypticola: HWQ56_20450
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Entry
HWQ56_20450 CDS
T07251
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pez
Pseudomonas eucalypticola
Pathway
pez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWQ56_20450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_20450 (uvrB)
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWQ56_20450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWQ56_20450 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Cauli_AT
HEM4
Motif
Other DBs
NCBI-ProteinID:
QKZ06027
UniProt:
A0A7D5H1V3
LinkDB
All DBs
Position
complement(4610756..4612771)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVINQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDVYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEGIKAELQERLDYLRSKDKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGPYEEEHAGRVIEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIRKQVAKEERVLVTVLTKRMAEDLTDYLADHDVKVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVTILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMERAIGETERRREKQVAFNEAHGITPQGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQMRDE
IAKLRERLLNV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgtttccagcccgccggcgaccagccggaagccatt
cgccagatggtcgaaggtatcgaggccggcctcgcgcaccagactctgctgggcgtgact
ggctcgggcaagaccttcagcatcgccaacgtcatcaaccaggtgcagcggccgaccctg
gtgctggcgccgaacaagaccttggctgcgcagttgtacggtgagttcaaggcattcttc
ccgaacaacgccgtggagtacttcgtttcctactacgactactaccagccggaggcttat
gtgccgtcgtcggacaccttcatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcggctgtcagccaccaaggcgttgcttgagcgcaaggatgccatcatcgtcaccacg
gtgtcgtgcatctatggcctgggcagcccggagacgtacctgaaaatggtcctgcacgtg
gaccgcggcgacaaactcgaccagcgcgccctgctgcgccgcctggccgacctgcagtac
acccgcaacgagatggatttcgcccgcgccacgttccgggtacgcggtgacgtgatcgat
gtgtacccggccgagtcggacctggaagccatccgcatcgagctgttcgacgacgaagtg
gagagcctgtcggctttcgacccattgacgggcgaggtgatccgcaagctgccgcgtttc
acgttctaccccaagagccactacgtgacaccgcgcgaaaccctgctggacgccatagag
ggcatcaaggcggaactgcaggagcgcctggattacctgcgcagcaaggacaagctggta
gaagcccagcgcctggagcagcgtacccggttcgacctggagatgatcctggagctgggt
tattgcaacggcatcgaaaactattcgcgctacctgtccggccgcccggccggggcgccg
ccaccgaccctgtacgactacctgccgcccgacgcgctgttggtgatcgatgagtctcac
gtcagcgttccgcaggtaggcgccatgtacaagggggaccgctcgcgcaaggaaaccctg
gtggagtacgggttccgcctgccttcggcgctggacaaccggcccatgcgcttcgacgag
tgggagggtgtcagcccgcagacgatcttcgtttcggccaccccgggcccgtacgaagaa
gagcatgctggccgggtgatcgagcaggtggtgcgccccacgggcctggtcgacccgcaa
gtggaagtgcgcccggccctgacccaggtggatgacctgttgtcggaaatccgcaaacag
gtggccaaggaggagcgggtgctggtcacggtgctcaccaagcgcatggccgaggacctg
accgactacctggccgatcacgacgtcaaagtgcgctacctgcactcggacatcgacacc
gtggagcgggtggagatcatccgcgacttgcgcctgggcaccttcgatgtgctggtgggc
atcaacttgctgcgtgagggcctggacatgcccgaggtgtcgctggtgacgattctggat
gctgacaaggaaggcttcctgcgttcggaacgttcgctgatccagaccatcggccgcgcg
gcgcgaaacctcaacggtcgggcgattctgtatgccgaccgcatgaccggttccatggag
cgcgccattggcgagaccgagcggcgccgcgagaaacaggtggcgttcaacgaggcccac
ggcattaccccgcagggggtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaaaggcatggccaaggctgccgaggaaagcgctaaa
tacgaaaacgaactgcgctcgccgagcgagatcaccaagcgtatccggcaattggaagag
aagatgtaccagttggctcgcgacctggagttcgaagcagcggcccagatgcgcgacgaa
atcgccaaattgcgcgagcggttactcaacgtctga
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