Plasmodium falciparum 3D7: PF3D7_1354300
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Entry
PF3D7_1354300 CDS
T00095
Name
(RefSeq) large subunit rRNA methyltransferase, putative
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pfa
Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfa03009
]
PF3D7_1354300
Ribosome biogenesis [BR:
pfa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PF3D7_1354300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Spb1_C
DUF3381
Motif
Other DBs
NCBI-GeneID:
814250
NCBI-ProteinID:
XP_001350255
PlasmoDB:
PF3D7_1354300
UniProt:
Q8IDF8
LinkDB
All DBs
Position
13:complement(join(2164239..2164456,2164575..2167416))
Genome browser
AA seq
1019 aa
AA seq
DB search
MGKKKKVGKERIDKYYKLAKTAGYRARSAFKLIQIAQKFNVFKNANILIDLCAAPGGWLQ
VAYKNMSKQSTIIGVDLVPIRKIDDNVITIKSDITTSDCIKKIKNIIKMDKADVILNDGA
PNVGTTYSYDSFNQNVLVLNSIKIAYIFLKKNGIFITKVFRNEEYISLIWVLEKLFGDVK
HIKPRSSREISSEIYLVGLNFLGKKVDKKLFDYTYIFSDQFKKNSNKSSLLETKQESYLD
NNENYFSDEESNDEEKVGEKIDKKKKKGLSTILKEKKKKNRQGYDVGDDYRATDICTFIK
SDNYVDLLIKNNKFTFDKNYKNNSDPMIKTIYECIYKNECTTKEIFFLCNDLKVLGKSDL
YNLIKWRYKIKKSVLNQTSKKNNLDFDNHDVEQTTQELSDVKESSQIDDFNTIVDKNISE
NELDNTSDEATEKDEKDQVDEIEEFSAYIEKKKKKEQKKKEKKLKKELEKKKKSNRGHQL
DFDENEIHFNKDILKLLNKQKFEDHLKILNNDQKDDLEIDHYEDTSSETEKLEHLNQLKN
SDLDKLEYLVDLDYEKQKMKEKKLNEEKSNEKLSRRKRAMDFKNEELMKIQKMMELKNEQ
LLMEKKLREYLSDEDDDEDDDDDDDDDDDDDDKEQEPKQQSDKHGDHQYDNKKSNSDNDV
DSLETTQDIFKENKHIKSMVDKIIRLRRSVKNEEEKSNVNHFFDQNIFSNIFSQLDEEDI
DAEFDSHIKNKKNVQKKDDSDKDGSISNDDNESIKEIDEHNLPKIPLPDKLAKKEKKKKL
KEKYGNNEVKMKNSSFSIVKTDENAQNLNNYFSNLVKDEDELAFIKCIGEKLIHKKSRMD
LIDDSFNRYSYMEDESNLPDWFLEEEKKYRRPVIPIDKKILDEYKGKINKITKMPIKKVI
EAKMRNRKREITKMKKLEAKIGKIEKNEDDPFLKQKAITNLLKKNKSDKKRDKSYIVCTG
KGSKMAKKKKNKKGKTMVKYVDKRLKKDKKAKKRIEKKKKNISRTKYSKSKPFKFRRKI
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaaaaaaagtcggtaaggagagaattgataagtattacaagctagccaaa
acggcaggatatcgtgctagatccgcttttaagttaattcaaatagctcaaaagttcaac
gttttcaaaaatgcaaatatattgattgatttatgtgctgctcctggagggtggttacaa
gtagcatataaaaacatgagtaaacaaagtactatcattggtgtggatttagttccaatt
agaaaaattgatgataacgttataacgataaagagtgacattacaacaagtgattgtatt
aagaaaataaagaatatcataaaaatggataaggcagatgttatattaaatgatggtgcc
ccaaatgtaggtacaacatactcttatgatagttttaatcaaaatgtattagttcttaat
agtattaaaatagcttatatatttttaaagaagaacggtatatttattacaaaagttttt
cgaaatgaagaatacatatccttaatatgggttttagaaaaattgtttggtgatgtgaaa
catataaaaccaagaagtagtagagaaatatcttctgaaatttatttagttggtcttaat
tttttaggtaaaaaagtagataaaaaattatttgactatacctatatttttagtgatcaa
tttaagaagaattcaaataaatcaagtttattggaaacgaaacaagaatcttatttggat
aataatgaaaattattttagtgatgaagaaagtaatgatgaggaaaaggttggggaaaaa
attgacaaaaaaaagaaaaaaggattatctactattttaaaagaaaaaaaaaaaaaaaat
agacaaggatatgatgttggtgatgattatagagctacagatatatgtaccttcataaaa
agtgataattatgttgatttattaataaaaaataataaatttacatttgataaaaattac
aaaaataattcagatccaatgattaaaactatatatgaatgcatatataaaaatgaatgt
acaacaaaagaaatatttttcctttgtaatgatttaaaagtattaggtaagtctgattta
tataatttaatcaaatggagatataaaattaaaaagagtgttctaaatcaaacttcaaaa
aaaaataatttagattttgataatcatgatgtggagcaaactacgcaagaattatctgat
gtgaaagaatcgtcacaaatagatgatttcaatactattgttgataaaaatatatcagag
aatgaattagataatacttcagatgaagctacagaaaaagacgaaaaagatcaagttgat
gaaatagaagaattttctgcatatattgagaaaaaaaagaaaaaagaacaaaaaaaaaaa
gaaaaaaaattaaaaaaagaactggaaaaaaaaaagaaaagtaatagaggtcatcaatta
gattttgatgaaaatgagatacattttaataaggatatacttaaattgcttaataaacaa
aaatttgaagatcatctaaaaatattaaataatgaccagaaggatgatctagaaattgat
cattatgaagatacttcaagtgaaacagaaaaattagaacacttaaatcagctaaaaaac
tcagatttagacaaattagaatatttggtagatttagattatgaaaaacaaaaaatgaaa
gaaaaaaaattaaacgaagaaaaaagtaatgaaaaattgtccagacgaaaaagagccatg
gattttaagaatgaagaacttatgaaaatacaaaaaatgatggaattgaaaaatgaacaa
ctgttgatggaaaaaaaacttagagaatatttaagtgatgaagatgacgacgaagatgat
gatgatgatgacgatgatgatgatgacgacgatgataaagaacaagaaccaaaacaacaa
agtgataaacatggtgatcaccaatatgataataaaaaatcgaacagtgataacgatgtt
gattccttagaaacaactcaagatatattcaaagaaaataaacatataaaaagcatggta
gataaaataattcgtttaagaaggagtgttaaaaatgaagaagaaaaatcgaatgttaat
catttctttgatcaaaatatattttccaatatatttagtcaattagatgaggaagatata
gatgcagaatttgatagtcatattaaaaataaaaagaatgtacaaaagaaggatgattct
gataaggatggctcaatttctaatgatgataatgaaagtataaaagaaatagatgaacat
aatttaccgaaaatacctttaccggacaaattagccaaaaaagaaaaaaaaaaaaaatta
aaagaaaaatatggaaataatgaagtaaaaatgaaaaattcttccttctccatagtaaaa
acagatgaaaatgcacaaaaccttaataattatttttctaatttagttaaggatgaagat
gaattagctttcattaaatgtataggagaaaagttgattcataaaaaaagtagaatggat
cttatagatgattcatttaatagatattcatatatggaagatgaatctaatttacctgat
tggttcttggaagaagaaaaaaaatacagaagacctgtaattccgattgataagaaaata
ttagatgagtataaaggaaaaattaataaaataacaaaaatgcctattaaaaaggttatt
gaggcaaaaatgagaaatagaaaaagagaaataacaaaaatgaaaaaacttgaagcaaaa
attggaaaaattgaaaaaaatgaagatgatccattccttaaacaaaaggctataacgaat
ttattgaagaaaaataaatcagataaaaaaagagataaatcatatattgtttgtactgga
aaaggatccaaaatggcgaaaaagaaaaagaacaaaaagggtaaaacgatggttaaatat
gtagataaaagacttaaaaaagataaaaaggctaaaaagagaatagaaaaaaaaaaaaaa
aatatatcgagaactaaatattctaaatcgaaaccatttaaatttagaagaaaaatttaa
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