Phascolarctobacterium faecium: PFJ30894_00619
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Entry
PFJ30894_00619 CDS
T05784
Symbol
ykoD_1
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K16786
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFJ30894_00619 (ykoD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfac02000
]
PFJ30894_00619 (ykoD_1)
Transporters [BR:
pfac02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
PFJ30894_00619 (ykoD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
RsgA_GTPase
AAA_25
AAA_29
AAA_16
AAA_23
SbcC_Walker_B
nSTAND1
AAA_18
AAA_27
ATP_bind_1
DUF4388
ATPase
AAA_30
TsaE
ABC_ATPase
AAA
NTPase_1
nSTAND3
Mg_chelatase
AAA_24
cobW
Motif
Other DBs
NCBI-ProteinID:
BBG62995
LinkDB
All DBs
Position
634449..635312
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AA seq
287 aa
AA seq
DB search
MMESVIRLENFYFAYNKSELVLQDIDLEIKKGSFTVVAGPSGAGKTTLCKAMTGIVPFYM
GGRYSGDVQVLGESTKGRRVSDIAMRVGLMLEDYESQLVSLTAGEEVAFSLLNHGFAPEE
VAERTRKALEDVGLPGRESYQLDELSGGQRQRLLLAATLAVHPEIIVLDEPVSAMDPDGA
HSLYELLYAIHQRYGTTIIVVEHRVDYLLPYVTDMVVLKEGQLVTADTFAAAARTMYEDE
ELRPLVPALWQVKLGVERRFGITLGEWRTEAEAAAELQLLGFEGGNA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagcgttatcaggctggaaaatttttattttgcttataataaatcggaactg
gtgctgcaggatatcgacctggagatcaaaaagggttcgtttacggtggtggccggcccc
agcggcgcgggcaaaactactttgtgcaaggcgatgacgggcatcgtgcctttttatatg
ggcgggcgttacagcggcgatgtgcaggtgctgggcgaatcgactaaaggccgccgggtg
tcggatatcgcgatgcgcgtgggactgatgctggaggattacgaaagccagctggtttcg
ctgaccgcgggcgaggaagtggctttcagtttgctgaatcacggttttgcgccggaggag
gtggcggagcgtacccgtaaggctttggaggacgtgggtctgccggggcgcgagagttat
cagctggacgagctgtcgggcgggcagcgccagcgtttgctgctggcggctactttggct
gtgcatcccgagatcattgtgctggatgagccggtatcggcgatggacccggacggggcc
cattcgctgtatgagctgttatatgcgatccatcagcgttacggcacgacgatcatcgta
gttgagcaccgggtggactatctgctgccttatgtgacggacatggtagtgctgaaggag
gggcagctggtaacggctgatacctttgccgctgcggcgcggacgatgtatgaggacgag
gagctgcgtccgctggtgcctgcgctatggcaggtgaagctgggcgtcgagcgccgtttc
ggtatcactttgggcgagtggcggactgaggctgaggcggctgcggaattacagctgctt
ggttttgaaggggggaacgcctga
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