Phascolarctobacterium faecium: PFJ30894_00884
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Entry
PFJ30894_00884 CDS
T05784
Symbol
oppD_2
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFJ30894_00884 (oppD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfac02000
]
PFJ30894_00884 (oppD_2)
Transporters [BR:
pfac02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PFJ30894_00884 (oppD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
ABC_ATPase
AAA_29
oligo_HPY
AAA_22
AAA_16
AAA_19
nSTAND3
MobB
NACHT
nSTAND1
TsaE
AAA_17
DO-GTPase2
PRK
RsgA_GTPase
ResIII
NB-ARC
Rad17
tRNA_lig_kinase
AAA_33
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BBG63257
LinkDB
All DBs
Position
884038..884829
Genome browser
AA seq
263 aa
AA seq
DB search
MLLKVTDLDISYGSKATVTGANIELKKGEILSIVGESGSGKTTVIRAIMGCLPGNGHVSG
GNIIFDGRNLLDNTPQQWREMCGTEISMIFQDSGNMINPIRRIGEQFIDYILTHAPQISR
REAYDLAIKMLDDVRMPNPDNVMRSYPFELSGGMRQRVGIALAMTFSPKLLLADEPTSAL
DVTTQAQIIRQIVDVRDEYNAAVIIVTHNLGVASYMSNKIVVMQNGMVVESGLREEIIGD
PQHEYTKELLAAVPVVGGKRYYA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaaagttacagatttggatatcagttacggcagcaaggctaccgtaactggt
gccaatatagaattgaaaaagggtgagattttatctatcgttggcgagagcggcagcggt
aaaacaacggtgatacgtgctattatgggctgtttgccgggtaatggacatgtaagcggc
ggcaatatcatttttgacggcagaaacctgctggataatacgccgcagcaatggcgtgaa
atgtgtgggactgagatttctatgatttttcaggacagcggtaatatgatcaaccctatt
cgccgtatcggcgaacagtttattgattatattctgactcatgcgccgcagatttccaga
cgggaagcttatgatctggctattaagatgcttgatgatgtaaggatgcccaatcctgac
aatgtaatgcgcagttatccgttcgaattatcaggggggatgcgccagcgtgtaggtata
gctttggcgatgaccttcagcccgaaactgcttttggctgatgagcctacaagcgcgctt
gatgtcacaacgcaggcgcagatcatcaggcagatcgttgatgttcgtgacgaatacaat
gccgcggtgatcatagttactcataatttgggtgtagcttcgtatatgtcaaataaaatc
gttgtgatgcagaatggtatggttgtggagagcggactgcgggaagagattatcggcgat
ccacagcatgaatatactaaggaactgctggcggctgttccggttgtgggaggtaagcgt
tattatgcctga
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