Parabacteroides faecis: NXY11_12035
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Entry
NXY11_12035 CDS
T08643
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
Organism
pfai
Parabacteroides faecis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
HD
Cas3_HD
AAA_30
AAA_22
T2SSE
DUF1827
PhoH
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UVQ48908
LinkDB
All DBs
Position
complement(2876898..2879315)
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AA seq
805 aa
AA seq
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MNYWSHIDKLLEVHICGVIEKSRKYTSLSITEAAALFHDFGKINPNFQKKLAGVNGGRYS
NHSYLSVFAFVYFAKTNGEACRQLLKAENTSDYKIKFRQVIALIAHHHGDLPNFVDLLNW
EEITNAAMFVEKNELPFSSFLSKQLSIKHNLFSINYDEFDFQNSSRFVKHLHLKFWRVNA
LQYFMDTQFGFASLIHADKRDAGNNVWYQFEDRIPQAIEDMDLALARKFQLFDQGPVSSD
LNRLRTAIRVEATKNISRHLLSSGRVFTITAPTGAGKTYTLLSVAKEIQRQKGQLGIIYA
LPFLSITEQVQRILDEDGIDYLPVNSKVNNQELVTALELYEVNPTLENLQKILQQDFAEH
SFDHPFIITTFVQFFETLVSNKNATLLKLPNFSNRIFLIDELQALPPRLYIFFSAWLEAF
CRKNNSYVILSTATMPKLDFPVKDYTDESVDPYLLFKEYSDNQPIELITPERYFSDKTFN
RYKIHLVDNDKFVLQDLVDHVLSQTKSCLVILNTIGDTKELYEKLEELSHVILLNTHFTP
SDRSEKIKMAKAFLNANEKVILISTQLIEAGVDIDFPVVYRDLCPLPSLIQSAGRCNRNN
TFPEMGDVYFFQLKKEQGKASSEVIYKGEAAEFLRFCKEYITDGIEENKLYAVQSDFFSS
IRDSLSIGDFKKGNKSINMIECVNNAEFERLGEFQLIDNDLFGEQYKYYIPKDENDFSCE
ELADLVIQSLSTIRFEESRKVRIEINNRLKKLSDRIINVRLNLKKDQVAPAYRNEKTYFD
IRVLSDLNNYSFEKGLELGTNNLLL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaattattggtcgcatatagacaagctattagaagttcatatttgcggagttattgaa
aaatcccgcaaatatacttctttatcgatcactgaagcggctgctctttttcatgatttt
ggaaagataaatcctaattttcagaaaaaactagcaggtgttaatggcgggagatattca
aatcattcttatttatctgtctttgcatttgtttattttgcgaagacaaatggggaagcc
tgccgacagttgcttaaggctgaaaatacttctgactataagattaagtttcggcaggta
atcgcattgatagcccatcatcatggagatttacctaattttgtagatttattgaattgg
gaagaaataactaatgcggctatgtttgtcgaaaagaatgagttgccgttttcttccttt
ctgtccaagcaattgtcaatcaaacataacctgttttcaataaattatgatgaatttgac
tttcaaaattctagtaggtttgtaaaacatctacacttgaaattttggcgtgtaaatgct
ttgcagtattttatggatacccaattcggatttgcatcgttaatacatgcagataaaaga
gatgccggaaataatgtttggtatcaatttgaggatcggattccacaggctatcgaagat
atggatttggcgttagctcggaaatttcaactgtttgatcaagggccagtttcatctgat
ttaaatcgtttaagaacggccattcgggtagaggctacaaagaatatttctcgccattta
ttatcatccgggagagtattcactataacagctccaactggtgcgggaaaaacttatacg
ttattatctgttgctaaagaaatacaacgtcaaaaaggacagttgggtatcatatatgct
ttacctttcctctctatcaccgaacaagttcaacggatattggatgaagatggtattgat
tatttgccagtgaattcgaaagtaaataatcaagaattggttacagccttggagctgtat
gaggtaaatccgactttagaaaatttgcaaaagatacttcaacaagattttgctgaacat
tcatttgaccatccttttattataacaacctttgttcaattttttgaaaccctggtaagt
aataagaatgcaacactattgaaattacctaatttctcaaatcgaatattcctcatagat
gagttgcaagcattgcctccacgtctatatatctttttttctgcatggctggaagctttt
tgccgtaaaaataattcgtatgttatattgtctaccgcgactatgcctaaattagatttt
ccggtaaaggattataccgatgaatcggttgacccatatctgttgtttaaagaatattct
gataatcagccaatagaattgataactcccgaaagatatttttcggataaaacgtttaat
cggtataaaatacatttggtagataatgacaaatttgtgctacaggatttggttgaccat
gttttgagtcagactaaatcttgtctggtgattttgaatactatcggtgatacaaaggag
ctatatgagaaactggaagaattatctcatgtcatcctactaaatactcactttacccct
tctgatcggagtgaaaaaataaaaatggcaaaagcctttttgaatgcgaatgaaaaggtt
attttgatatctactcaattgatcgaggctggtgttgatattgattttcctgtagtatat
cgggatttatgtccgttgccaagtcttattcaaagtgccggaagatgtaataggaataat
acttttccggaaatgggagatgtttatttctttcaattaaaaaaggaacaaggaaaagct
agttcagaagtaatctacaaaggagaggctgcagagtttcttcgtttttgtaaggaatat
attactgatggaatagaagaaaataaattatatgctgtccagtctgatttcttttcttct
attcgggattctctttctataggtgattttaagaagggaaacaaatcaataaatatgatt
gaatgtgtcaataatgctgagtttgaacgtttaggagagtttcaattaatagataatgat
ctgtttggtgaacagtataaatattatattccaaaagatgaaaatgattttagttgtgaa
gagttggccgatttagtgatacagtctttaagtacaataagatttgaagagagtagaaaa
gttcggatagaaattaataatagacttaagaagttaagtgataggataataaatgtgcgt
ttgaatttgaagaaagatcaagtggctcctgcttatcgaaatgaaaaaacttattttgat
atacgcgttttatctgatttgaataattattcatttgaaaaaggtttagagttaggaaca
aataacttattactataa
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