Pseudomonas synxantha LBUM223: VO64_4582
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Entry
VO64_4582 CDS
T03769
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VO64_4582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfb03400
]
VO64_4582
Enzymes [BR:
pfb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VO64_4582
DNA repair and recombination proteins [BR:
pfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VO64_4582
Prokaryotic type
VO64_4582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKA85128
LinkDB
All DBs
Position
5119816..5120508
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AA seq
230 aa
AA seq
DB search
MTDGDRIKLEPSWKHALRDEFEKPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRANKFLEQSGETPIDWVLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggcgaccgtatcaaactcgaacccagctggaaacacgccctgcgtgatgag
ttcgagaagccctatatggcccagttgcgcgaattcctgcgtcaggaacatgccgccggc
aaagagatctacccgcccggcccgttgattttcaacgctctcaactcaacgcccctggac
aaggtcaaggtcgtgatcctcggccaggacccctaccacggtcccggccaggcccatggc
ctgtgcttttcggtacaaccgggggtgccggcgccgccgtcgctggtcaatatctataaa
gagctcaagcgcgacctgaacatcgacatccccaaccacggctacctgcaaagctgggcc
gaccagggcgtgctgatgctcaacaccaccatgactgtagagcgggcgaatgccaatgcc
cacgcgggcaagggctggcagttctttaccgatcggattatcgaggtggtcagtgagcat
cagccccatctggtgtttctgctgtggggcgctcacgcccaaagcaagcagaagctgatc
gacgccaccaagcatctggtgctgacgtcggtgcatccgtcgccgttgtccgcgtatcgc
gggtttctgggatgtgggcatttcagccgggccaacaagtttcttgagcaaagcggtgag
acacccattgattgggtgttgccgcctgtctga
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