Pseudomonas fluorescens A506: PflA506_0036
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Entry
PflA506_0036 CDS
T02114
Symbol
trpI
Name
(GenBank) HTH-type transcriptional regulator TrpI
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfc03000
]
PflA506_0036 (trpI)
Transcription factors [BR:
pfc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PflA506_0036 (trpI)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_5
HTH_30
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
AFJ55457
LinkDB
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Position
40857..41753
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AA seq
298 aa
AA seq
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MSRNLPPLNALRAFEATARLNSVSQAAQLLHVTHGAVSRQLKVLEEHLGVSLFVKDGRGL
KLTDAGVRLRDASSEAFERLRDVCAELTQRGADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVLSPRFAGFEHL
RQAPASELLEQPLLHTTSRPQAWPSWARQHGIEPGALKLGQGFEHLYYLLEAAVAGLGVA
IAPEPLVAEDLRAGRLVAPWGFSETPAHLALWLPKRAADGRAGQLAQWLKAELLRQPV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaacctccctcccctcaatgccctgcgcgcttttgaagccactgctcgcctt
aacagcgtcagccaggctgcacagctattgcacgtgacccacggtgcggtcagccggcag
ttgaaagtactggaggagcatttgggcgtgagcctgttcgtcaaggatggacgcggcctt
aaactcacagatgctggcgtcaggctacgagatgccagcagcgaggcttttgagcggttg
cgcgacgtgtgcgccgaactcacccaacgcggcgctgatgcgcccttcgttcttggctgt
tcaggcagcttgctggcgcgttggtttatccctcggctggggcggttgaatgccgacttg
ccggatttacgcctgcacctgtcggcgggcgaaggcgatctggacccgcgccgtccgggg
ctggatgccctgctggtattcgctgagccgccttggccggcggacatgcaagtgtatgaa
ttggccagcgagcgtatcggcccggtcttgagcccccgcttcgccggttttgaacacctg
cgtcaggccccagcgtcggaactgctggagcaacccttgcttcacaccacgtcaaggccg
caagcctggcccagttgggcacggcaacacggcatcgaacccggtgcgctgaagctcggc
caggggtttgagcatttgtattatttactggaagcggcggttgccggcttgggagtggca
attgcgccagaaccgctggtggcagaggacctgcgagcgggtcgcctggtggcgccgtgg
gggttcagtgaaaccccggcgcacctggcgttgtggctacccaagcgcgccgcagacggg
cgcgccgggcagttggcgcaatggctcaaggctgagctgttgcgtcaaccggtgtaa
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