Pseudomonas fluorescens A506: PflA506_3451
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Entry
PflA506_3451 CDS
T02114
Symbol
ihfA
Name
(GenBank) integration host factor, alpha subunit
KO
K04764
integration host factor subunit alpha
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfc03032
]
PflA506_3451 (ihfA)
03036 Chromosome and associated proteins [BR:
pfc03036
]
PflA506_3451 (ihfA)
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_3451 (ihfA)
DNA replication proteins [BR:
pfc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PflA506_3451 (ihfA)
Chromosome and associated proteins [BR:
pfc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PflA506_3451 (ihfA)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PflA506_3451 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Meth_synt_1
SNF5
Motif
Other DBs
NCBI-ProteinID:
AFJ58909
LinkDB
All DBs
Position
complement(3858739..3859041)
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AA seq
100 aa
AA seq
DB search
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgggggctttgacgaaagctgagatggcggaacgtctgtacgaagagttgggtctgaac
aagcgcgaggccaaggaattggttgagctgttttttgaagagatcagacacgctctggaa
gacaacgaacaggtcaaattgtccggtttcggcaattttgacctgcgagacaaacgccag
cggcctggccgcaatccaaaaacgggagaagaaatcccgatcacggctcgccgtgtggtc
acctttcgtccagggcagaagttgaaggcccgagttgaggcttatgctggaaccaagtca
taa
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