Pseudomonas ogarae: PSF113_0227
Help
Entry
PSF113_0227 CDS
T01734
Name
(GenBank) bnr repeat-containing glycosyl hydrolase
Organism
pfe
Pseudomonas ogarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_12
DUF4347
Motif
Other DBs
NCBI-ProteinID:
AEV60258
LinkDB
All DBs
Position
270633..277871
Genome browser
AA seq
2412 aa
AA seq
DB search
MWWSKGKSRVTEGAQALASPMIMSLEPRMLFDGAVAATVADAAQPDAQPTADAAKAPTAD
QTSDNHAPQGQADATEAAVPGKSVVFVDSRVKDAGSLLQGVAPGTDVVQLDATKDGLQQI
ADYLDTHQGVSSVQIIAHGNAGDLWLGNSYLSADNVQARSEVLAQIGQDMNAGGDILIYG
CYTAEGDRGLSLVNSLAQLTGRDVAASDDRTGLGGDWNLEIATGTIESANVLSANAMSEY
QWGLATWTATNNLNSGVGSLRAALLSAQSGDIVTFNTSMTVALTQVLVVDKNITIDGDLN
NDNVADVTLDGQYRTQIMQVTSGTTATLDGLVITRGMVAGNGGNGGDDALVSQGGGIYNA
GTLTLRNVTVTANAASGGGGGGGVTPQYAGGAGGGGGAITGGTGGKGGDTLNSTGSNGTA
GQGGAGGGFFNIGGRGGSTTGGAGGAAYPGYSTGSAGGTAVSGGLSIGGGGGGDGYDDIG
GAGGGAVGGIYNDTGATLRIIGNSTISNNVGAGGGGGGGGAGGSYLQAGGAGGVGVGAIW
NKGSILITAANFAALAGNVGGSGVGGTSAGTAGVSPASVANVYGDGGTINTNYVPDETPP
TATVVVANTNLNSGGTSTVTITFSEAVTGLTAADLTVQNGSVGTLTSGDGGITWTGTLTA
ASDIADTTNIITLNNTGVADLAGNAGVGTTDSNNYIVNDTVAPTASIVVSDTALRIGETS
TVTITFSEAVSGFTTADMTVANGTLSGLSSSDGGITWTATLTPDAAITDTSNLIVLNNTG
VADLNGNAGVGTTNSNNYAVDTQRPTATIVVSDTALRVGETSVVTITFTEAVSGFTTADL
TVANGTVTGLSSSDGGITWTGTLTPSASITDTSNLITLDNTGIADLAGNAGSGTTDSNNY
AIDTQGPTATIVVADNALSIGETSLVTITFSEAVTGFTLADLTVANGSLSGLSSSDGGIT
WTATLTPSASVSDATNLIILANTGVADAAGNVGSGTTSSNNYAVDTQRPTATIVVADNAL
SVGETSLVTITFNEAVTGFTTADLTVANGTVTGLSSGDGGITWTGTLTPSASTSDTSNLI
TLDNTGVADAAGNAGSGTTDSNNYAIDTARPTATIVVADTAIAIGETSVVTITFSEAVTG
FTLADLSVTNGSLSGLSTSDNITYTATFTPSAGVSDATNLITLNNTGVVDGAGNTGSGTT
DSNNYAVDTLRPTATIVVADTALSVGETSLVTITFSEAVSGFDNSDLSIANGTLSAVSSS
DGGITWTATFTPALGVSDTSNLIVLNNTGVNDGAGNTGSGTTNSNNYQVDTNVPTATIVI
ADTTLSIGETSVVTVTFNSAVSGFDNADLTVSNGTLSTMSSTDGGVTWTAIFTPSVSISD
TSNVITLDNTGLINGAGNAGVGTTDSNNYAVDTVRPTATIVVADTAIAAGETSLVTITFS
EAVTAFTSADLTVANGVISGLSSSDGGITWTATFTPTAGVTDTSNVISLNSGGIVDLAGN
ANVGGTDSNNYALDTERPTATIVLADSNLSVGETSLVTITFSEAVSGFDNSDLSVANGTL
SAVSSSDGGLTWTAVFTPTLGVRDTSNLITLNNTGVSDAAGNTGTGTTNSANYAIDTQVP
TATIVVADTSLSIGETSQVTITFNEAVSGFDNSDLSISNGTLSNVSSSDGGVTWTATFTP
SASIADTSNLITLDNTGVVNVSGNAGVGTTDSNNYAIDTMRPTATIVVADTALAAGETSL
VTITFNEAVTGFTDADLTVANGTLSGLSSSDGGITWTGTFTPAAGITDTSNVITLANSGV
ADLAGNAGSGTTDSNNYSVDSQRPTATIVLSDSVLKPGETAQVTITFSEAVTGFSNADLS
VANGTLSAVSSSDGGLTWTATFTPTLGVTDASNLITLDNTGVSDAAGNTGTGTTDSANYV
VETQVPTATIVVADSALQIGETSQVTITFSEAVSGFDNSDLTISNGTLSNVSSTDGGVTW
TATFTPSASISDTSNLISLDTSGVVNASGNSGVGVVDSNNYAIDTVRPGATITVGDTSLG
IGQSTTVTISFTEAVSGFDLSDLSVANGVLSNLASSDGGLTWTATLTPTAGVNDATNLIL
LDASNVQDLAGNAGVGIAISANYALDATRPTATIVVADPNLTVGETTQVTFTFSEAVTDF
DLSDLSVTNGELSNLTTSDGGKTWTATFTPTVNLTDPSNFIALDTSNVSDLTGNAGASVA
VSNNYAIDTVVPNDVKPPPEFLTSDPVTVIPPSEVPLQPIVFTPPTGNLGSPLGFPPLFE
QRDVGGGLRPIGDIFINHGALAPSYIAQVFSSDAAGDGSGQGFLGFGGGDGGVFGSSTLS
TLFGQDSTSEGESMEAFGSQSMQGGDVSQGLRGMFGAPTLGQQLQQLKDSEQRQVDSLAT
ALRQVGISQVQA
NT seq
7239 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggagcaaaggcaaatcgcgggtaaccgagggcgcacaggccctggcatcgcca
atgatcatgtccctggagccgcgaatgctgttcgacggcgcggtggcggcaaccgtggcc
gacgccgcgcaaccggacgcgcagccgaccgctgatgccgcgaaggcgccgacggccgac
cagacttccgacaaccatgcacctcagggtcaggctgacgccaccgaggctgccgtccca
ggcaagtctgtggtgttcgtcgactcccgggtcaaggatgccggcagccttctacaaggt
gtggctcctggtaccgatgtggtgcaactggatgccaccaaagacggtttgcaacagatc
gccgattatctggacacccaccagggcgttagctcagtgcagatcatcgcccacggtaac
gccggtgatttgtggctgggcaacagctacctgtcggcggacaacgtccaggcccgcagc
gaagtgctggcacagatcggccaggacatgaatgccggtggcgacattctgatctacggt
tgctacaccgctgagggcgaccgcggcctgagcctggtcaactcgctggcgcagctcacc
ggccgagacgtggccgcctccgacgaccgcactggcctgggcggcgactggaacctggaa
atcgccaccggcaccatcgaaagcgccaacgtgctctcggccaatgccatgagcgagtac
caatggggcctggccacctggaccgcaacaaacaacctcaatagtggcgtgggctctctg
cgcgccgccttgttgtctgcacagagcggcgacatcgtcacgttcaataccagcatgacc
gtcgccctgacccaggtgctggtggtcgacaagaacatcaccatcgatggcgacctcaat
aacgacaacgtcgccgacgtgaccctcgacggtcagtaccgcacccagatcatgcaagtg
acgtccggcaccaccgccaccctcgatggcctggtgattacccgtggcatggtggcaggc
aacggtggtaacggtggtgacgatgcgctggtgtcccagggcggcggcatctacaacgcc
ggcaccttgaccctgcgaaacgtcacggtgaccgcgaacgccgcttcgggcggtggtggt
ggcggcggtgtgacgccgcagtacgccggtggtgccggtggcggcggtggcgcgatcacc
ggcggtaccggtggcaagggcggcgacacgctcaactccacgggttccaacggcacggcc
ggacaaggtggcgcgggcggcggcttcttcaacattggcgggcgtggcggttccaccacg
ggtggcgcgggcggtgcggcttatccgggctacagcaccggttcggccggcggcacggcg
gtcagcggcggcttgtccatcggcggtggcggcggtggcgatggttatgacgacattggc
ggcgctggtggcggcgcggtggggggtatctacaacgataccggcgcgaccctgaggatc
atcggcaattcgaccatttccaacaacgtcggcgccggcggtggcggtggcggcggcggg
gctggcggtagctatctccaggcgggcggtgcgggcggtgtcggtgtcggtgccatctgg
aacaaaggctcgatcctgatcaccgctgccaacttcgccgccctggccggcaacgtcggc
ggcagtggcgtgggtgggacgagtgcgggcaccgcgggtgtttcgccggcgtcggtggcc
aacgtctacggcgatggcggtactatcaacaccaactatgtgccggatgaaacgccgccc
accgcgaccgttgtggtggccaataccaacctcaactccggtggtacatcgacagtcacc
atcaccttctccgaagccgtgactggccttaccgcggcggacctgacggtgcagaacggc
agcgtcggcaccttgaccagtggcgacggtggcatcacctggaccgggacgttgactgcg
gccagtgacatcgccgacaccaccaacatcatcaccctgaacaataccggcgttgccgac
ctggccggcaatgccggcgtgggcaccaccgactcgaacaattacatcgtcaatgacacg
gtagcgcccacggcgtccatcgtggtgagcgacactgccctcaggattggcgagacctcc
acggtcaccatcaccttctccgaggccgtttccggctttaccacggccgacatgacggtg
gccaacggtacgctcagcggcctgagcagcagcgacggtggcatcacctggacggccacg
ctgacaccggatgcggcgatcaccgatacctccaatctcattgtcctgaataacactggc
gtggcggacctcaatggcaatgccggcgtggggacgaccaactccaacaactacgccgtc
gacacgcaacgcccgaccgccaccatcgtggtgtctgacaccgcgctgcgcgtcggtgaa
acctccgtggtgaccatcaccttcaccgaggccgtgagtggtttcaccaccgccgacctg
acggtcgccaatggcacggtcaccggccttagcagcagcgacggaggtatcacctggacc
gggacgcttaccccgagcgccagcatcactgacaccagcaacctgatcaccctggataac
accggcattgcggacttggcgggcaacgccggtagcgggaccaccgactccaacaactac
gccatcgatacccagggcccgaccgccaccatcgtggtggccgataacgcgctgagcatc
ggcgaaacctcgctggtgacgattaccttcagcgaggccgtaacgggtttcaccttggcg
gacctgaccgttgccaacggctccttgagcgggctgagcagcagcgacggcggtatcacc
tggaccgcgacgctcaccccgagcgccagcgtcagcgatgccaccaacctgatcatcctg
gccaataccggtgtggcggacgcggcgggcaacgtcggcagcggcaccaccagctccaac
aactatgccgttgacacccagcgtccgacggcgactatcgtcgtggccgacaatgctctg
agcgtcggcgaaacctcgctggtgaccatcactttcaacgaagcggtgacaggctttacc
accgccgacctgacggtcgccaacggcacggtcactggtctgagcagcggcgacggcggc
attacctggaccgggacgctcacgccaagcgccagcaccagcgacaccagcaacctcatc
accctggataacaccggcgtggctgacgcggcgggcaacgctggcagcggcaccaccgat
tccaataactacgccatcgacaccgcacgtccgaccgccaccatcgtggtcgccgacacg
gccattgccattggcgaaacatcggtggtgacgatcaccttcagcgaggcggtgaccggt
tttaccctggcggacctgagcgtcaccaacggcagcctgagcggcctgagcaccagcgac
aacatcacctacaccgcgaccttcacaccgagcgcgggtgtcagcgatgccaccaacctg
atcacgctcaataacacgggcgtagtggacggcgcgggcaataccggcagcggcaccacc
gattccaacaactacgccgtcgacaccctgcgtccgaccgccaccatcgtggtcgccgac
acggcgctgagcgtcggcgaaacctcgctggtgaccattaccttctccgaggcggtcagc
ggcttcgacaattcggacctgagcatcgccaacggcacgctgagtgcggtcagcagcagt
gatggcggcattacctggaccgccaccttcaccccggccctcggggtcagcgacacgtcc
aacctcattgtcctgaacaacaccggggtcaacgatggggcgggcaacaccggcagcggc
accaccaactccaacaactaccaggtcgacaccaacgtgccgacggcgaccatcgtgatt
gccgataccacgttgagcatcggcgaaacctcggtggtcaccgtgacgttcaactcggcg
gtcagcgggttcgacaacgcggacttgaccgtcagcaacggtacgctcagcaccatgagc
agcactgacggcggcgtcacctggacggccatcttcacgccgagcgttagcatttccgat
accagcaacgtgatcaccctggacaacaccggcttgatcaacggcgcgggcaacgcgggt
gtgggcaccaccgactccaacaactacgctgtcgacacggtgcgcccaacggcgaccatc
gtcgtggccgacaccgccattgccgccggcgagacctcgctggtgaccatcaccttcagc
gaggcggtgacggcgttcaccagtgctgacctgacggtcgccaacggcgtgatctcgggg
ctgagcagcagcgatggcggcatcacctggaccgcgaccttcacgccgacggctggcgtc
acggacaccagcaacgtcatctcgctcaacagtggtggcatcgttgacttggccggcaat
gccaacgttggcgggaccgactccaacaactacgcgctggacactgaacgtccgaccgca
acgatcgtgctggccgactccaatctcagtgtcggcgaaacctcgttggtgaccatcacc
ttcagcgaggcggtgagcggtttcgacaattcggacctgagcgttgccaacggcacactc
agcgctgtcagcagcagcgatggcggcctgacctggacggcggtgtttaccccgaccctc
ggcgtgcgggatacgtccaacctgatcaccctgaacaacactggcgtgagtgacgcggcg
ggcaataccggcaccggcacgaccaactcggccaactacgcgatcgacacgcaagtgccg
acggccaccattgtggtggccgatacgtccctgagcatcggtgaaaccagccaggtgacc
atcaccttcaacgaagcggtgagcggtttcgacaacagcgacctgagcataagcaacggc
acactgagcaacgtgtcgtcctccgacggcggcgtcacctggacggccacgttcacaccg
agcgcgagcattgccgataccagcaacctgatcaccctggacaataccggtgtcgtcaac
gtctcaggcaacgctggcgtcggcaccaccgattcgaacaactacgccatcgacaccatg
cgcccaacggcgaccatcgtcgtggccgacaccgcccttgccgccggcgagacttcgctg
gtgactatcactttcaacgaggccgtgacgggcttcaccgacgccgacctgactgtcgcc
aacggtacgctcagcgggttgagcagcagtgacggcggcatcacctggaccgggactttc
acgcctgccgctggcattaccgacactagcaatgtcattacccttgccaacagcggcgtc
gccgacctggcgggcaacgccggcagcggcaccaccgattcgaacaactacagcgtcgac
agccagcgtccgaccgccaccatcgtgctgagcgattcggtgttgaaaccgggtgaaacc
gcgcaggtgaccatcaccttcagcgaggcggtgaccggtttcagcaacgctgacctgagc
gttgccaacggcactctgagcgccgtcagcagcagcgatggcggcctgacctggaccgcg
accttcacgccgaccctgggtgtgaccgacgccagcaacctgatcaccctggacaatacc
ggcgtgagcgatgcggccggcaataccgggacaggcaccaccgattcggccaattatgtg
gtcgagacgcaggtaccgacggccacgatcgtggtggccgacagtgcgctgcagataggg
gaaacctcgcaggtcactattacgttctcggaagcggtgagcggtttcgacaacagcgac
ttgaccatcagcaacggcacgctcagcaatgtgtcgtccaccgacggcggcgtcacctgg
acggccacgttcacgccgagcgcgagcatttccgacaccagcaatctgatcagcctggac
accagcggcgtggtaaacgcctcgggcaacagcggtgtcggcgtggtggactccaacaac
tacgcgatcgacacggttcgccctggcgccaccatcaccgtgggcgataccagcctgggc
atcggccagagcaccaccgtgaccatcagcttcaccgaggcggtgtccggtttcgacttg
tcggatctcagtgtcgccaatggcgtgttgtccaaccttgccagcagtgacggcggcctg
acctggaccgcgaccctgacgccgactgccggcgtcaacgatgccaccaacctgatcctg
ctcgacgccagcaatgtgcaggacctggccggcaacgccggcgtgggcatcgcgatttcc
gccaactatgcactcgacgccacccggccgacggcaaccatcgtggtcgctgatccgaac
ctgacagtgggcgagaccacccaggtgactttcactttcagcgaagcggtgacggatttt
gacctgtcggacctcagcgtcaccaacggtgaactgagcaacctgaccaccagcgatggc
ggcaagacctggaccgcaacgtttacaccgacggtaaacctcaccgacccgagcaacttc
attgccctggacaccagcaacgtcagcgacctgacgggcaacgccggggccagcgtggcg
gtgtccaacaactatgcgatcgacaccgtggtgcccaacgatgtgaaaccgccgccggag
ttcctgacttccgacccggtcacggttatcccgccgtccgaggtgccgctgcaaccgatc
gtctttaccccgccgaccggcaacctggggtcgccactgggcttcccaccgctgttcgag
caacgggacgtgggcgggggcctgcggccgatcggggatattttcatcaaccatggcgca
ctggcgccgagctatatcgcccaggttttcagcagtgacgccgccggcgatggcagtggc
caggggttcctgggctttggtgggggcgatggcggggtgttcggcagcagcacgctttcg
accctgttcggccaggactccacttccgagggcgagtcgatggaggccttcggcagccag
tcgatgcagggcggcgatgtgtcccaagggctgcgcgggatgttcggggcacccaccctg
ggtcagcagctgcaacagctcaaggacagtgaacaacgtcaggtcgatagcctggcaacc
gcgttacgacaggtcggcatcagccaagtgcaggcctga
DBGET
integrated database retrieval system
