Pseudomonas ogarae: PSF113_1226
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Entry
PSF113_1226 CDS
T01734
Symbol
ligC
Name
(GenBank) LigC
Organism
pfe
Pseudomonas ogarae
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AEV61253
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Position
complement(1439274..1440962)
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AA seq
562 aa
AA seq
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MKAFAELYAELDATTSSNAKLAAMQAYFTKATPQDAAWAVYFLSGGRPRQLVPVKILREL
AVQVSGLSTWLFEESYQAVGDLAETISLVLPESPHRSDEGLAPWIEEKLLPLRGESPEVL
ALRLPTLWAQLDRPSLMLCIKLITGSFRVGVSKLLVTRALAGMANLDSKRVAQRLVGYTD
LSHRPTAASYLKLIAAESADEHAQRGGQPYPFFLAHALSAPVEQFDTLLGPANDWQVEWK
WDGIRSQVIKRDGHLWVWSRGEELLTERFPELHALAQVLPDGTVIDGEIVVWKTTRPMTE
DAFDPEAPLQPAVQPFALLQQRIGRKTLGKKILDDAPVVVMAYDLLEWQGEDWRSRPQAE
RREQLEALIARVHSPVLLPSPTVTGQDWLDLARQREASRRLGVEGMMLKARNALYGVGRT
KDMGVWWKWKIDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDNPPDSRERTLVPFAKAY
SGLTDAQMRQVDSIVRKTTVEKFGPVSSVTPTLVFELGFEGIALSNRHKSGIAVRFPRML
RWRQDKRVEEADTLATLQDLLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcgccgagctgtacgccgaactggacgccaccacctccagcaatgccaag
cttgccgccatgcaagcctatttcaccaaggctacgccccaggacgcggcgtgggccgtg
tatttcctgtccggcgggcgtccacggcaactggtgccggtaaaaatcctgcgggagttg
gccgtgcaggtgtccgggctgtccacgtggctgttcgaagagagctaccaggccgtgggc
gatttggccgaaaccatctcgttggtgctgccggaatcgccccatcgttccgacgagggc
ctggcgccgtggatcgaggaaaaactgctgccattgcgtggcgagtcgcccgaggtgctg
gcgctgcgcttgcccacgttgtgggctcaattggaccggccgagcctgatgctgtgcatc
aagctcatcaccggcagctttcgcgtcggcgtgtcaaaactgctggtaacccgggccctg
gccggcatggccaacctggacagcaagcgggtggcccaacgcctggtgggctacaccgac
ctgtcccatcggccgacggccgccagttacctcaagctgatcgcggccgaatccgccgat
gaacatgcccagcgcggcggccagccttatccgtttttcctggcccatgccctgtctgcc
ccagtggagcaattcgacaccctgctgggaccggccaacgactggcaggtggaatggaaa
tgggacggcatccgttcccaggtgatcaagcgcgatggccatctgtgggtctggtcccga
ggcgaagaactgctgaccgagcgcttccccgaactgcacgccctggcgcaggtactgccc
gacggtaccgtgatcgatggcgaaatcgtggtgtggaaaaccacccggccgatgaccgag
gacgccttcgacccggaggcgccgctgcaaccggcggtgcaacccttcgccctgttgcag
cagcgcatcggtcgcaagaccctgggcaagaaaatcctcgacgatgccccggtggtggtg
atggcctacgacctgctggaatggcaaggcgaggactggcgcagccgcccccaggccgag
cgccgcgaacaactggaagcgctgattgcccgtgttcacagcccggtgttgttgccatcg
ccgacagtcaccggccaggactggctcgacctcgcccgacaacgcgaagcctctcgccgc
ctcggtgtcgagggcatgatgctcaaggcccgcaacgcgctgtacggcgtcgggcgcacc
aaggacatgggcgtgtggtggaaatggaagatcgaccccttcagtgtcgacgcggtgctg
atctacgcccagcgcggccacggccggcgcgccagcctgtacagcgactacaccttcgcc
gtatgggacaacccgccggacagtcgcgagcgcacgctggtgccgtttgccaaggcctat
tcagggctgaccgatgcacaaatgcgccaggtcgacagcatcgtgcgcaagaccaccgtg
gagaagttcggcccggtgagcagcgtcacgcccaccctggtgttcgaactgggcttcgaa
ggcatagccctgtccaatcgccacaagagtgggatcgcggtacgttttccacggatgctg
cgctggcgccaggacaagcgcgtcgaggaagccgacacactggcgacgctgcaggatctg
ctgaaatag
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