Pseudomonas ogarae: PSF113_3654
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Entry
PSF113_3654 CDS
T01734
Symbol
sbcC
Name
(GenBank) SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfe
Pseudomonas ogarae
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_3654 (sbcC)
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSF113_3654 (sbcC)
Archaeal homologous recombinant proteins
PSF113_3654 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_15
nSTAND3
RsgA_GTPase
MMR_HSR1
DUF19
cobW
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEV63655
LinkDB
All DBs
Position
complement(4297092..4300733)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTTEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGDIATGDPRTLLRRGTGDGFAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKDSHRQLQDQATGVTPLAPEARAELDQRF
NDAQQLLKAQQAQLKQLEQQHTWLRDLGLLQDEHASAAEQLQQAQADWNALADERLKLVR
LEQLAPQRHQFIRQAELSQQLDPLALQIQQLTQQQLNLHDQQAELEKSLGAAQLALATAR
QHSSDSAPLLRQAFEEQSTLARLAKDTSQAAGRQEQAQQACAEGQRTIDTLLEQQKLVAE
RLQRIAGELEQSKHLAPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEQGATRAAEEL
ASRRQDLEVLYKEAGAEPEAVAEQIQLLGTLLQDNRKQLRAFEDLTRLWASQQELDKRGA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRDLLERQRLARSESVEQLRAQLQ
DEQPCPVCGSVEHPYHQPEALLENLGRFDETEEANARKAVDLLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLASQQQSLTPSLEAHPLSAQLLTQDANKRDAWLTQQNSQLNLRISQDEQR
QTALLTLQQDAARMAQRLREAEAASQQASLHLGNQQQELARDRQRLDEELSHFSTLLPAD
TLQALRSEPAATFLQLDRQIAQRLEQLEQQRDELGEQLQRQQTLEKEQDRQQTRLQQLEA
ACLQFSALSEQQQACQEKLTQLLGEHTSAEQWQQQLDQRLEQTRDTEATANQQLQQLRND
LVQLAAELKARQEQAQALEHERQALAAGIAQWRTTHPELDDAALEALLGLDDHHVSQLRQ
RLLNSEKAIEQARVLLTEREQRLQNHQAQHNGNLAPEQLAEALTELQTQFAASEQRCAEL
RAEQAEDQRRQNANQALAQQIEQAYAEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgcgatccgcctcaagaacctggcgtccctggccgggccttttgaaatc
gatttcaccaccgaacccttggccagcgccggcctgttcgccattaccggccccacgggc
gccggcaagagcacgttgctcgacgccttgtgcctggcgctgttcggcgccgtgccgcgc
ctcaacaacaccggacgcgacgccaaggtgccggacgtcgatggcgacattgccacgggc
gacccacgcacgctgttgcgccgcggcaccggcgatggctttgccgaagtggattttcgc
ggcatcgacgggcgccgctatcgggcccgctgggaagccaatcgcgcccgggaaaaggcc
ggcggcaagttgcaagccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgaatacaagacccagctcgaagcggccctgggcctgaacttcgaa
cagttcacccgtgccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgat
gacaacgatcgcagcgaactgttggaaaaactcaccgacactgccctgtatacccgcctc
ggccgccgcgccttcgacaaggccaagcaagccaaggacagccaccggcagttgcaagac
caggccaccggtgtcacgccgctggcccccgaggcccgggccgagctggaccagcgtttc
aacgacgcccagcaactactcaaggcccaacaggcgcaactcaagcaactggagcagcag
cacacctggctgcgcgacctgggcctgttgcaggatgaacacgccagcgccgccgaacag
ctgcaacaggcccaggccgattggaacgccctggccgacgaacgcctgaaactggtccgc
ctggaacaactggcgccccaacgccatcagttcatccgccaggccgaactgagccaacag
ctcgaccccttggccttgcagatccagcagcttacccagcagcagctcaatctccatgat
cagcaggccgaactggaaaaaagcctgggcgccgcgcaactggcgctggctacggcccga
caacacagcagcgacagcgcgccgttgctgcgccaggcctttgaagagcaaagcaccctg
gcccggcttgccaaggacacgagccaggctgccggacgccaggaacaggcgcaacaggct
tgcgccgaaggccagcgcaccatcgataccttgctcgaacagcaaaagctggtggccgag
cgcttgcagcgcatcgccggggagcttgagcaaagcaagcacctggcaccgctgagcgat
gcctggaacgcctatcgagatcgcctccaacagctgatgctgatcggcaatcgcctgaac
cagggccaggccgaactcgccacgctggaacaaggcgccacccgcgccgccgaggaactg
gccagccgccggcaagacctcgaagtgctctacaaggaagctggcgccgagccggaggca
gtggccgaacagatccagttgctcggcaccctgctgcaagacaaccgcaagcaattgcgt
gccttcgaagacctgacccggctgtgggccagtcagcaagagctggacaaacgtggcgcc
gagcttgaacaacgccagcaacgggcgttgcaggaacgtgaccggctggtgcgtgaaggc
ggcgaagccaaggccgaactgaccattgccgaacagaccctgaccgtcacccgcgatctg
ctggagcgccagcgcctggcccgcagcgaaagtgtcgagcaactgcgcgcacagttgcag
gatgaacagccctgccccgtgtgtggcagcgtcgagcatccttatcatcagcccgaagcc
ctgctggaaaacctcgggcgcttcgatgaaaccgaagaggccaacgcccgtaaggccgtc
gacctgctcaatgaaaaagtcatcgacctgcgggcgcaatacagcggggtcatcgcccag
ctcaaggaactcaaacaacagcaggaacaactcgccagccagcagcagagcctgacgccc
agccttgaagcccacccgttgtcggcgcaactactgacccaggatgcgaacaagcgcgac
gcctggctgacccagcagaacagccaactgaacctgcgcatcagccaggacgaacagcgg
caaaccgccctgctgaccctgcagcaagacgcagcgcgcatggcacagcggctacgtgaa
gccgaggcagccagccaacaggcgtcactgcacctgggcaaccagcagcaggagctggcc
cgcgaccgccagcgcctggacgaggagctgagccacttcagcaccctgctacccgctgac
accctacaggccttgcgcagcgagcccgccgcaaccttcctgcaactggaccggcaaatc
gcccagcgcctggagcaactggaacagcagcgcgacgaactgggcgaacagctccagcgc
cagcagaccctggagaaagagcaggaccgccagcagacccgtctccagcaactggaagcg
gcttgcctgcaattcagcgccctgagcgagcaacaacaggcctgccaggagaaactcacg
caactgctcggcgagcacaccagcgccgaacagtggcagcaacaactcgaccagcgcctg
gaacagacgcgggataccgaggcgacggccaatcagcagttgcagcaattgcgcaacgac
ctggtgcaactggccgccgaactcaaggcccgccaggagcaggcccaagccctggagcac
gaacgccaggcgctggccgccggtatcgcgcaatggcgcaccacccatccggaactggac
gatgccgccctcgaggccctgctcggcctggacgaccaccacgtcagccagttgcgccag
cgcttgctcaacagcgaaaaagccatcgaacaggcccgcgtcctgctcaccgaacgcgaa
cagcgcctgcagaaccaccaggcccagcacaacggcaacctggcgcccgagcaactcgcc
gaagccctcaccgaactgcaaacccaattcgccgccagcgaacagcgctgcgccgaactg
cgcgccgaacaggccgaggaccagcgccggcagaacgccaaccaggccctggcccagcag
atcgaacaggcctacgccgaataccagcgctgggcacgcctcgatgccctgatcggctcg
gccaccggtgaccgcttccgcaagctggcccaggcctacaacctcgacttgctggtgcac
cacgccaatgcccaactgcggcaactggtgcgccgctaccggctcaagcgtggcggcagc
atgcttgggctgctggtgatggacacggaaatgggtgatgaactgcgctcggtgcactcg
ttgtccggcggcgaaaccttcctggtttccctcgccctggcattgggcctggcctcgatg
gcatccagcacactgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcaactggcgatggacgccctcgacggactgcaggcccagggccgcaag
gtcgcggtgatttcccacgtacaggaaatgcacgagcggattccggtgcagatccaggtg
cgtcgccagggcaacggcttgagcacagtggaggtgaaatga
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