Paludibaculum fermentans: IRI77_03415
Help
Entry
IRI77_03415 CDS
T06895
Name
(GenBank) TonB-dependent receptor
Organism
pfer
Paludibaculum fermentans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
TonB_dep_Rec
SdrD_B
PEGA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
QOY89020
UniProt:
A0A7S7SME9
LinkDB
All DBs
Position
complement(857005..860319)
Genome browser
AA seq
1104 aa
AA seq
DB search
MSKWMCLVAFLCALNAPVYAQVASAEISGTILDSSGSAVANAKVRVTNSGTNRDHETFSN
TTGGYIVQLLSPGDYVVTVEAPGFRRLVRSGITLQVNQQTQLDLTMQLGQTSEVIEVTEQ
APLLESESSVLGTVVNEQLVNQLPLNGRNFVQLATLSPGVNGVGYSAGGTIMSGSRPDDR
RPGTEIFSNGNREGSNNFLYDGIDDNERLTLSIVLRPPVEGVREFKIQTNLYSADVGRNS
GAVVDVITKSGTNQMHGSVFEFLRNSAMDARNYFSPKGTAFPAFRLNQFGGSFGGPVVLP
KLYNGKNKTFFFFDYEGYRRDSQQLLLGNIPTAKMRTGDFSETATIYDPLSTRPNPNGTG
VIRDAFANNVIPSDRFDPIALKMVRAYPNPTSSGRFNNYLANLVQNQKWNQGDVRVDHQI
SSKDNFFARWSIQNTETRVPSSFPSTSIPGISIPVNLGDEGSFAGTSFSPDQHAVASWAR
VITPKLVNDFRLGFNRFRLDYTADQFAPGQALGNQLGVPNANVTPNEQNLPIFSPSNYIG
IGQTRSLPIFRRENTYQIVDNMSFTSGKHTLKWGLDFRRRQLTIYQTNQGNGRFNFSPAL
TDSRAGSGGDSMANFLLGFATTAAHDYTLNWPGERGSEWGLYLADDWRITRKLTLNLGLR
WDYYTPYSEVANRWANFNISTAKIDIAGRNGVDKYAGVQPYRKNFGPRFGFAYQLMPRTV
LRGGFGMFYNPTGSEGGSLRLFRQLPFGSTVTVSPGDINVGPRVRDGFAPLVPVDYTLAD
RPFGAVFAVDAKFRPSYAEQYNLTLEHEITPLAMVVKLAGVGNLGRRLYNTYNANQPIPG
AAALNTRRPLYGIAPNISDVSYFSTDGLGSYHSLQFTLDKRFAKGMSALVGYAWSHSIDN
VPLEFGGGSAGPQPQDPRNIKAERGNSITDMRHRLTVSYLYELPFGKGKTLMNHGGIANA
VLGGWQTNGILVIQSGLPFSPVLQTSTTNGTGSRPDVVGPISYPGTRLRWFDAAAFGTPA
AYTYGNAGRNILFGPGRWNWDMSLFKNFVIKDQMRFELRAEAFNIFNHPQLGQPNANIGN
AQVGQITSTVGNPRQLQMALRFQF
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatggatgtgcttggtagcattcctttgcgccctgaacgcgccagtgtacgcg
caggtcgcttcggccgaaatcagtgggaccatcctggattccagtggttccgctgttgcc
aacgccaaagtcagggtcaccaactccggtacgaaccgggatcacgaaaccttcagcaac
acgacgggcggctacattgtgcagctgctgtcaccgggtgactacgtagtcaccgtggag
gcgccgggcttccgccgcctggttcgaagcggcatcacgctccaggtcaaccagcagact
cagttggacctgacgatgcaactggggcagacttcggaagtgatcgaagtaacggagcag
gctccgttgctggaatccgaatcctcggtcctggggacggtcgtgaacgagcaactggtc
aaccagttgccgctcaacggccgcaactttgtccagttggccacgctcagccctggcgtc
aacggcgtgggttactccgccggcggcacgatcatgagcgggtcgcgtccggacgaccgg
cgtcccggcaccgagatcttctccaacggcaaccgcgagggctcgaacaacttcctgtat
gacggcatcgatgacaacgagcgcctgacgctctccatcgtgctgcgtcctcccgtcgag
ggcgtgcgcgagttcaaaatccagaccaacctctatagcgcggacgtcggccgcaattcc
ggagccgtggtggatgtcatcacaaagtccggcaccaaccagatgcatggcagcgttttt
gagttcctgcgcaactcggccatggacgcccgcaattacttcagccccaaaggcacggcg
ttccccgccttccggttgaaccagttcggcggctcgttcggcggacccgtcgtcctgccc
aagctgtataacggcaagaacaagacgttcttcttcttcgactacgaaggctatcgccgc
gactcgcagcagttgctgcttggcaacatccctaccgccaaaatgcggaccggcgatttc
agcgagaccgccaccatttacgatccgctctccacccggcccaaccccaacggcacaggt
gtcattcgcgatgcgttcgcgaacaacgtaatcccgtccgaccgtttcgatcccatcgcc
ttgaagatggtccgcgcctatcccaaccccacctcaagcgggcggttcaacaattacctg
gcgaacctcgtccagaaccagaagtggaaccagggcgacgttcgcgtcgaccatcagatc
tcctcgaaggacaacttcttcgcccgctggtccatccagaacaccgaaacacgcgtaccc
agcagcttcccctccaccagcatcccgggcatctcgattcccgtgaacctgggcgacgaa
gggtcgttcgcgggcacatcgttttcgccggatcagcacgccgtcgcgagttgggcgcgt
gtcatcacgccaaagctcgtgaacgatttccggctgggcttcaaccggttccgcctggac
tacacggccgatcagttcgcccccggccaggcgctcggcaaccagttgggtgtccccaac
gccaacgtcacgcctaacgagcagaatctgcccatcttctcgcccagcaattacatcggc
atcgggcagacccgctcgctgcccatcttccgccgcgagaacacctatcagatcgtcgac
aacatgagcttcacgagcggtaagcacacgctgaaatggggtctcgatttccgccgccgc
caactcaccatctaccagaccaaccagggcaacggccgcttcaatttctcgccggccctg
accgactcgcgcgccggctccggcggtgacagcatggccaacttcctgctcggcttcgcc
accaccgccgcccacgactacaccctcaactggccaggcgaacgcggcagcgaatggggc
ctgtacctcgccgatgactggcgcattactcgcaaactgaccctcaacctcggacttcgc
tgggattactacacgccctatagcgaagttgccaaccgctgggccaacttcaacatctcc
accgccaaaatcgacatcgccggccgcaatggcgtggacaagtatgccggagtccagccc
taccgcaagaacttcggcccgcgcttcggctttgcttaccagttgatgccacgcaccgtt
ctgcgcggaggcttcggcatgttctacaaccccaccggcagcgagggcggcagcctccgt
ctgttccgccaactcccctttggctcaacggtcaccgtctcgccgggcgatatcaacgtc
ggacctcgtgttcgcgatgggttcgctccgctggtgcccgtcgactacacactggccgac
aggccgttcggcgccgtcttcgcggtcgacgccaaattccggccgtcttacgcggaacag
tacaacctgaccctggagcacgaaatcacaccgctcgccatggtcgtgaagttagccggt
gtgggcaacctcggccgccggctgtacaacacctacaatgccaaccagcctatccccgga
gccgcggccctcaacacgcgccggccgctctacggcatcgcgcccaacatcagcgacgtg
agctacttctccacggacggtctgggctcctaccactcgcttcagttcaccctcgacaag
cgtttcgccaagggcatgagcgcgctggtcggctacgcctggtcgcattccatcgacaac
gtgccgttggagttcggcggcggctcggccggcccccaaccccaggatccgcgcaacatc
aaagccgagcgcggcaactccatcaccgacatgcgccaccgcctcaccgtgagctacctg
tatgaactgcccttcggcaaaggcaagacgctgatgaatcacggcggcatcgccaacgcg
gtgctcggcggctggcagaccaatggcatcctcgtgatccagagcggcctgccgttctcg
ccggtcctccagacctcaaccacgaacggcaccggcagccgtccagacgtggtcggcccc
atcagctaccccggtacgcgccttcgctggtttgacgccgctgctttcggtaccccggcc
gcctatacctatggcaacgcgggccgcaacattctctttggacccggccgctggaactgg
gacatgtccctgttcaagaacttcgtgatcaaagaccagatgcgtttcgagttgcgcgcc
gaggcgttcaacatcttcaaccatccccaactcggccagccgaatgccaacatcggcaac
gcccaggtgggccagatcaccagcaccgtggggaacccgcgccagttgcagatggcgctc
cggttccagttctag
DBGET
integrated database retrieval system
