Paludibaculum fermentans: IRI77_29365
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Entry
IRI77_29365 CDS
T06895
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfer03000
]
IRI77_29365
Transcription factors [BR:
pfer03000
]
Prokaryotic type
Helix-turn-helix
Other families
IRI77_29365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
AAA
Mg_chelatase
HTH_8
AAA_16
AAA_2
DUF815
Yuri_gagarin
Motif
Other DBs
NCBI-ProteinID:
QOY92183
UniProt:
A0A7S7SPS1
LinkDB
All DBs
Position
7406940..7408532
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AA seq
530 aa
AA seq
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MDITMLPSIILAIAEQRSLDAVLDSIIQAIVQQPEVGLARIWLKENGFSCPACDGTPEVA
LHLRASGGTPLEAGVDWHYTTGRFHTVPLDSKLKIAQIAGTGRGVRIDDLAADSQWVGEP
DWIRREQLVSFAAHPMVFHGEVLGVLAVFRRVIADDACWEWLRVLADAAAVAVANARAFE
AAEKLQKELQLERDYLREEVREVGSFGEILGNSAALQRVLRQVEMVAATEATVLILGESG
TGKELVARAIHQRSARARKPLVKVNCGSIPHELFESEFFGHVRGAFTSAVSDRLGRFQLA
DGGTLFLDEAGEIPMDLQAKLLRVLQEGEFERVGENVTRKVDVRVVAATNRDLKEEVAKG
RFRLDLYYRLAVFPLEMPPLRDRREDIPELAAQFVRHAAARFHVAEPRLSHRELQRAMRY
DWPGNIRELQNAVDRAVILARDGRLELDLPDGPAAEPARIPLELADVVPEPRWREMEKAN
LTAALRRTNFRVSGPGGAAELLELHPATLSSRMKALGIRRQPDRSPNPGL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaccatgctgccgtcgatcatcctggccatcgccgagcagcgctccctggat
gccgtcctcgactccatcatccaggccatcgtccagcagcccgaagtgggcctggcccgc
atctggttaaaggagaatggcttctcctgtcctgcctgcgacggaacaccagaggtcgcc
ctgcacctgcgagccagcggcggcactccgctggaggctggcgtcgattggcattacacg
accggccgcttccacaccgtgccgctggactcaaaactgaagatcgcccagatcgccgga
acaggccgcggcgtgcgcatcgacgatctggcggccgactcgcagtgggtgggcgagccc
gattggatccgccgcgagcaactcgtcagctttgccgctcaccccatggtctttcacggc
gaagtcctgggcgttctggccgtgttccggcgcgtcattgcggatgacgcctgctgggag
tggctgcgtgttctggccgatgccgcggccgtcgccgtggccaatgcccgcgcctttgaa
gcggcggagaaactccagaaggaactccagttggagcgcgactacctccgcgaagaggtc
cgcgaagtgggttcgttcggcgaaatcctgggcaacagcgcggcgctccaacgggtcctg
cgccaggtggaaatggtggcggcgaccgaggcgacagtgctcatcctgggcgaaagcggc
acgggcaaggaactcgtcgcccgggccatccaccagcgcagcgcccgcgcccgcaaaccc
ctggtcaaagtgaactgcggctccatcccgcacgagctcttcgaaagcgagttcttcgga
cacgtgcgcggcgcattcaccagcgccgtcagcgatcgcctgggccgcttccagttggcc
gacggcggcacgctcttcctcgacgaggccggagagatccccatggacctgcaggccaag
ctgctgcgggtcctccaggaaggcgagttcgaacgggtcggcgagaacgtcacacgaaaa
gtggatgtccgcgtggtggccgccaccaatcgcgacctcaaagaggaggtggcgaagggc
cgcttccggctggatctttactaccgcctggccgtcttcccgctcgagatgccgccactg
cgggatcgccgggaagacatcccggaactggccgcccagtttgtccgccacgccgccgca
cgcttccacgtggccgaaccacgcctcagtcacagggagctgcagcgggccatgcgctac
gactggccgggcaacatccgcgaactccagaacgccgtcgatcgcgcggtcatcctggcc
cgcgatggccggctcgaactggatctgcccgatggacccgcggccgagccggcgaggatc
cctctcgaactggccgacgtcgtgccggagccgcgttggcgcgaaatggagaaggcgaac
ctcaccgccgccctgaggcgcaccaatttccgggtttccggtccgggcggcgcggctgaa
ctgctggaactgcatccggccaccctcagctcgcgcatgaaggcgctggggatccgccgc
cagccggatcggtctccgaaccctggtttgtga
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