KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF718035
Entry
PFLUOLIPICF718035 CDS       T03767                                 
Name
(GenBank) transcriptional regulator
  KO
K04764  integration host factor subunit alpha
Organism
pff  Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:pff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pff03032]
    PFLUOLIPICF718035
   03036 Chromosome and associated proteins [BR:pff03036]
    PFLUOLIPICF718035
   03400 DNA repair and recombination proteins [BR:pff03400]
    PFLUOLIPICF718035
DNA replication proteins [BR:pff03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PFLUOLIPICF718035
Chromosome and associated proteins [BR:pff03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    PFLUOLIPICF718035
DNA repair and recombination proteins [BR:pff03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      PFLUOLIPICF718035
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 Meth_synt_1 SNF5
Other DBs
NCBI-ProteinID: AJZ95255
LinkDB
Position
3884635..3884937
AA seq 100 aa
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGFGNFDLRDKRQ
RPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
NT seq 303 nt   +upstreamnt  +downstreamnt
atgggggctttgacgaaagctgagatggcggaacgtctgtacgaagagttgggtctgaac
aagcgcgaggccaaggaattggtcgagctgttttttgaagagatcagacacgctctggaa
gacaacgaacaggtcaaattgtccggtttcggcaattttgacctgcgggacaaacgccag
cggcctggccgcaatccaaaaacgggagaagaaatcccgatcacggctcgccgtgtggtc
acctttcgtccagggcagaagttgaaggcccgagttgaggcttatgctggaaccaagtca
taa

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