Pandoraea faecigallinarum: AB870_03450
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Entry
AB870_03450 CDS
T03972
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pfg
Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfg01011
]
AB870_03450
Enzymes [BR:
pfg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AB870_03450
Peptidoglycan biosynthesis and degradation proteins [BR:
pfg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AB870_03450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF6491
Motif
Other DBs
NCBI-ProteinID:
AKM29393
UniProt:
A0A0H3WS45
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All DBs
Position
complement(3428344..3430038)
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AA seq
564 aa
AA seq
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MRLIVSLLLTLLLAACASTAPTTGASNSSPDAHSKSPVASTAKGKQRVSSDQPIDLDNDS
INDLAYGSDDADLWSRIRHGFAIPDLDTDLAQDRTQWYAQRPEYVERMIQRSEKYLFHIV
EELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMFQDERRDV
LASTTAALDYLSKLYAMFGDWHLALAAYNWGEGNVQRAIDRNQAQGLPTDYLSLRMPTET
RYYVPKLQAIKNIIAHPDIYSVKLPEIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRA
LNPSFRKPVILGAAQTQILLPFDSAEVFQRRLKSYDKPLSSWTTYTSASRERPEDVARKL
GVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDQDISASVASSAVLALEPDLPDTRKVM
VRARKHDTLAGVAARSGVSVAQIKSWNRLRRDTLTAGQLLVLHVPVKDASRVVAASAPEP
AAKNDDDAPRTRLVKGKNGKMIRVVDRRPAAGPAKTTRTAAGKAAPAAGVSAKAAAKAPA
RTVAKAAAKPAAKTATKVTKTAQR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcgttagcttgctcctgacgctgctattggcagcgtgtgccagcacagcg
ccgaccacaggtgcatcgaattcctcgcccgatgcgcacagcaagtcgcctgtcgcttcg
accgcaaaaggcaagcagcgcgtctcgagcgatcagcccatcgacctcgacaacgattcg
atcaacgacctggcctacggcagcgacgacgccgatctctggtcgcgcatccgccacggc
ttcgccatccccgatctcgataccgatctcgcacaggaccgcacgcagtggtacgcgcag
cgtcccgagtatgtcgagcgcatgattcagcgttccgagaagtacctgttccacatcgtc
gaagaactcgaacgtcgccatatgccgacggaactcgcgctgttgccgttcgtggaaagt
gcgtacaacccgcaggcgctctcgacggccaaggccgccggcatgtggcagttcatcccc
agcaccggcaagacatacaacctcaagcagaacatgttccaggacgagcgccgcgatgtg
ctcgcctcgacgaccgccgcactcgattacctctcgaagctttacgcgatgttcggcgac
tggcacctcgcgctcgccgcctacaattggggcgagggcaacgtgcagcgcgccatcgac
cgcaatcaggcgcagggtctgccgaccgattatctaagcctgcgtatgccgaccgagacg
cggtactacgtgccgaagctccaggccatcaagaacatcattgcgcatccggacatttac
agcgtgaagctgccggagatcccgaaccacccgtacttcgtgagcgtgaccaccaagcgc
gacatcgacgtggcactggccgccaagctggccgatcttccgctcgacgaattccgtgcg
ctgaacccctcgttccgcaaacctgtcattctgggcgccgcgcaaacgcagatcctgctg
ccgtttgacagtgccgaagtcttccagcgtcgtctgaagagctacgacaaaccgctgtca
agctggacgacctatacgtcggcctcgcgcgagcgtccggaagatgtggcgcgcaagctc
ggcgttgacgccgcggtcatccgctcggtcaacaacattgcgccgcgcatgcgtctgaag
gccggttcgacgttgctggtgccgcgctcggacgatatcgatcaggacatcagcgcatcg
gtggcgagcagtgccgttctggcactggagccggatctgccggatacgcgcaaggtgatg
gtacgcgcccgcaagcacgatacgcttgccggtgtggcggcgcgtagcggtgtgagcgtg
gcccagatcaagagctggaatcgtctgcgtcgcgatacgctgacggcgggccaattgctg
gtgctgcacgtgccggtcaaggatgcgtcgcgagtggttgccgcgtcggcacccgagccc
gcggcaaagaacgacgacgatgcgccacgcacccgtctggtcaagggcaagaacggcaag
atgattcgcgtggtcgaccgtcgtccggccgccggcccggccaagacgacgcgcaccgca
gcgggcaaggcggcgccggccgccggggtgagcgcgaaagcggcggccaaggctcccgcc
agaacggttgcgaaggccgcagcaaagccggccgccaagaccgcgacgaaggtcacgaag
accgctcagcggtaa
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