Pseudomonas fitomaticsae: KJY40_23665
Help
Entry
KJY40_23665 CDS
T08740
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KJY40_23665 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfit01007
]
KJY40_23665 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfit03016
]
KJY40_23665 (aspS)
03029 Mitochondrial biogenesis [BR:
pfit03029
]
KJY40_23665 (aspS)
Enzymes [BR:
pfit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
KJY40_23665 (aspS)
Amino acid related enzymes [BR:
pfit01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KJY40_23665 (aspS)
Transfer RNA biogenesis [BR:
pfit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KJY40_23665 (aspS)
Prokaryotic type
Other AARSs
KJY40_23665 (aspS)
Mitochondrial biogenesis [BR:
pfit03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
KJY40_23665 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UFP99005
LinkDB
All DBs
Position
complement(5239678..5241453)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDRDGLAQVVFDPDRAESFAA
ADRVRSEYVVKITGKVRLRPAGATNANMASGMIEVLGYELEVLNESETPPFPLNEFSDVG
EETRLRYRFLDLRRPEMAEKLRLRSRMTTSIRRYLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKDIMGLTEGMIRNLFKEVLDLEFGEFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD
QLKEVDFKVFSGPANDPKCRIAALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
AAGVDGLQSPIVKNIPEANLNVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL
KLLTCEWAPMWVVDFPMFEENDDGSFSALHHPFTAPKCSPEELEANPAGALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGINEAEQEEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLRETPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccattattgcggccaactgaacgaaagcctggaaggccaggaaattacc
ctttgcggatgggttcaccgtcgtcgcgaccacggcggggtgattttcctcgatatccgt
gatcgtgacggtctggcccaggtagtgttcgatccggatcgcgccgagagcttcgccgcc
gccgatcgcgtgcgcagcgaatacgtcgtgaagatcaccggcaaggtgcgtctgcgtccg
gccggtgccaccaacgccaacatggcgtcgggcatgattgaagtgctgggctacgagctg
gaagtactgaacgagtcggaaaccccgccgttcccgctgaacgagttctccgacgtgggc
gaagaaacccgtctgcgttatcgcttcctggacctgcgtcgtccggaaatggccgagaag
ctgcgtctgcgttcgcgcatgaccaccagcatccgtcgctacctggacgagaacggcttc
ctcgacgtcgaaacgccgatcctgacccgtgccactccggaaggcgcgcgcgactacctc
gtgccgagccgtacccacgccggttcgttcttcgccctgccgcaatcgccacagctgttc
aagcaactgctgatggttgccggtttcgaccgctactaccagatcgccaagtgcttccgc
gacgaagacctgcgtgccgaccgtcagcctgagttcactcagatcgacatcgagaccagc
ttcctcgacgaaaaagacatcatgggcctgaccgaaggcatgatccgcaacctgttcaag
gaagtgctggatctggaattcggcgaattcccgcacatgacattcgaagaggccatgcgt
cgttacggttccgacaaaccagacctgcgtaacccgctggaactggtcgacgtggccgat
cagctgaaagaagtggatttcaaggtcttcagcggccctgccaacgatccgaaatgccgt
atcgccgcgctgcgcgttccaggcggggcgagcatgccgcgcaagcagatcgacgactac
accaagttcgtcggtatctacggtgccaagggcctggcgtacatcaaggtcaacgagcgt
gctgccggtgttgacggtctgcaatcgccgatcgtgaaaaacatcccggaagccaacctg
aacgtgatcctcgatcgcgtcggcgcagtcgacggcgacatcgtgttcttcggcgccgac
aaggccaagatcgtcagtgaagccctgggcgcgctgcgtatcaagctcggtcacgacctg
aagctgctgacctgcgagtgggcaccgatgtgggtcgtcgacttcccgatgttcgaagag
aacgatgacggcagcttctcggctctgcaccacccgttcaccgcgccgaagtgctcgccg
gaagagctggaagccaacccggctggcgctctgtcccgcgcctacgacatggtgctgaac
ggcaccgagctgggtggcggttcgatccgtatccaccgcaaagagatgcaacaggcggtg
ttccgtctgctgggcatcaacgaagcggaacaggaagagaagttcggcttcctgctcgac
gccctgaaatacggcgcgccgccgcacggtggtctggccttcggtctggaccgtctggtg
atgctgatgaccggcgcccagtcgatccgtgaagtgatcgccttcccgaaaacccagagt
gctgccgatgtgatgacgcaggcgccgggtgtcgtggatgcgaaggcattgcgcgaattg
cacattcgtttgcgcgaaacgccaaaggccgagtaa
DBGET
integrated database retrieval system
