Pseudocercospora fijiensis: MYCFIDRAFT_114041
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Entry
MYCFIDRAFT_114041 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfj03021
]
MYCFIDRAFT_114041
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_114041
Transcription machinery [BR:
pfj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MYCFIDRAFT_114041
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
MYCFIDRAFT_114041
SLIK complex
MYCFIDRAFT_114041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
DEAD
Motif
Other DBs
NCBI-GeneID:
19330239
NCBI-ProteinID:
XP_007921919
JGI:
114041
UniProt:
N1QB20
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
DAPGEEDADFDMESPPPAPAEAMDRDRSSSEPHSRPGKRKADMDDEEIYMKENPELYGLR
RSGRARPTRRVVNEDNDDDAVNSGRRRKRQKLAGGRPASFREERDSSRAATSDASVSEDD
TYGGQRGRTFAKKHRQKMQAIASGSGTPQLSEVRFSSRRAAKVTTYNEDEGFDFSEEDTE
NMTPNYYYAEEDTRPSIDQVLNHRLLEGVESQAPDKHEYEFLIKWQDQAHYHATWHKWAD
LTTSRGFRRLENYFRKIVKVDQQVANDPNVPPEDKERWNLDREAYLDSLIDYNKVERIIG
ARDGEEGTEYFVKWKALFYDSCTWEKGELISQIAQGEIDRFLDRSSKLPVSDKTEQNPHT
RSKYVPFRTQPSYIKGGELREFQIHGLNFLAHHWCRGNNVILADEMGLGKTVQTVSFMNW
LRYDRRQQGPFIVVVPLSTMPAWADTFDNWTPDLNYVVYNGNEAARKVIREYELLVDGNP
KKVKFNVLLTTYEYILADATFLSQIKWQFMAVDEAHRLKNRESQLYAKLMDFGAPSRLLI
TGTPMQNTLSELSALMDFLMPGKIHVEENIDLTSEHASKKLAELTDAISPYMIRRTKQKV
ENDLPPKTEKIIRVELADVQLEYYKNILTRNYAALNAGNKAQKTSLLNIMMELKKASNHP
FMFPNAEERILAGSEAREDQLKALITSSGKMMLIDQLLMKMRKDGHRVLIFSQMVKMLDI
LGDYLQLRGYQFQRLDGTIAAGPRRMAIDHFNAPDSQDFCFLLSTRAGGLGINLMTADTV
ILFDSDWNPQADLQAMARAHRIGQKKPVTIYRLVSKDTVEEEVLERARNKLMLEFITIQR
GVTDKDARELGDRMARAGASVVEPTSSDDISRILKKRGQKMFEQSGNQRKLEELDIDAVL
ENAEEHKTEQPEGMTTDGGEEFLRSFEYTDVKIDLEWDEIIPKSELDKIKDEERKKQEEE
YLESVIEQNQPRKRKAAAGGEEGRDQRAAKKRAREANMQHMDEEGSGDDDSDHGADPRRP
LGEKECRHLIRAYERFGAFEDKQDDIIKEARLIGRDINIVKDTLKEVIDTAIRLQKEHAD
QLAEAERTTGKAVTKKEKKAVLFDFRGVKRLNAQTLTERPEEMRMIRDCVDQISDWRNFR
VPEASKPASYTCEWGAKEDGMLCVGIARHGYGAWVPIRDDEELGLADKFYLEEHRVGAKE
ARNKEGDDTKVAKSPGAVHLVRRANYLLSVLQHKTSNGTNIAAKKALENHHRNNRKHLGQ
FHGRMATPGSPAPGGIRKQHSSDGRRYHQSDIRNSGDRRTPHGSPNGHRDDRYRPRHSEE
RRPQHQRNGSSHANGTPSRPLTESEQRCRKILDPISATLVKVSGATKKRIPDDDARLKMI
KLGIVGIGTHINSYIRQHDDRSLEDTLWDYVSEHHWPQSKAADKRVPGHKLRDMYKKIAG
KDSAAGGSKPS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
gatgctcctggcgaagaagatgcagactttgacatggaaagcccgccgcctgcgcctgcc
gaggctatggaccgcgacagatcatcgtctgaaccgcattcgagaccaggcaagcggaaa
gcagatatggatgacgaagagatttacatgaaggagaaccccgagctgtatggcttgcgg
cgtagcggccgagcaagacctactaggagggtagtaaacgaagataacgacgatgatgct
gttaacagcggcagacgtcggaaacgtcaaaagctcgcaggcggccgaccagcttccttt
cgcgaggagcgagactcgtcgcgcgctgccacctctgacgcatctgtgtcggaagacgac
acatatggcggccagcgcggccgaacgtttgcaaagaagcatcgacaaaagatgcaagcc
attgcctcgggctctggaactccccagctgagcgaagtccgcttttcgtcacggcgtgcg
gccaaggttactacctataacgaagacgaaggcttcgacttcagcgaagaagacaccgag
aacatgacgccgaactactactacgcagaagaggacacccgaccatctatagaccaagtg
ctgaatcatcggttgctcgagggagtcgaatctcaagctcccgacaagcacgagtatgag
tttctcatcaaatggcaagatcaggcacactaccacgcgacatggcacaagtgggcagat
ctcacaacctctcgtggcttccgtcgactagaaaattacttccgcaagattgtgaaggtg
gatcagcaggtcgccaacgatccgaacgtgccacccgaggacaaagagcgttggaacctc
gatcgagaagcctacctcgactcgctgatcgactacaacaaagtggaacgtatcattggt
gcaagagatggcgaagagggaaccgaatatttcgtcaagtggaaagctctcttctacgac
tcctgcacatgggaaaagggtgagcttatcagccagatagcacagggcgagattgatcgc
ttcctcgatcggtcctcgaaactcccagtgtcggacaagactgagcaaaaccctcacacg
cggtcgaaatacgtgccgtttaggactcagccgtcatatatcaagggcggagagcttcga
gagttccagattcatggattgaacttcctggctcatcactggtgtaggggcaacaatgtc
atcctcgcagatgagatgggtctgggaaagaccgtgcagacggtctcgttcatgaactgg
ttgcggtacgatcgtcgtcaacagggaccgttcattgtggtcgttccgctttctaccatg
ccggcctgggctgacaccttcgacaactggacaccggatctcaactatgtggtgtacaat
ggcaacgaggctgctcgcaaggtcattcgcgagtacgaacttctcgtcgatggcaacccg
aagaaggtgaaattcaacgtgcttctaacgacatacgagtacatcctggccgacgccacc
ttcctctcacagatcaagtggcagttcatggctgttgacgaagcacatcgcctgaagaat
cgagagtcacagctatacgctaagctcatggacttcggcgctccaagcagattgctcatc
accggcacacctatgcaaaacaccttgagcgagctttccgcgttgatggacttcctcatg
cctggcaagattcacgtggaagaaaatattgatctcacttcagaacacgccagcaagaag
ctcgcagagcttacagatgccatctcgccttacatgattcgtcgcaccaagcaaaaggtc
gagaacgatttgccaccgaagaccgagaagatcattcgtgttgagctggctgatgtgcag
ttggagtactacaagaacatcttgactcgcaactatgctgcactcaacgccggcaataag
gcccagaagacttctctgctcaacatcatgatggagctgaagaaggcatcgaatcatccc
ttcatgtttcccaatgccgaggagcgcattctggcaggcagcgaggcacgagaagaccag
ctcaaggcacttatcacgtccagcggcaagatgatgctcatcgaccaattgctcatgaag
atgcgcaaggacggccaccgcgtgctgatcttcagccaaatggtcaaaatgctcgacatt
cttggcgactatcttcaactacgtggctaccaattccagcgccttgacggtaccattgcg
gctggtcctcgacgcatggctatcgatcacttcaatgcgcccgacagccaggacttctgc
ttcctgctttccacccgtgccggtggtctgggcatcaatctcatgactgccgacaccgtc
atcttgttcgactccgactggaacccacaagcggatcttcaggcgatggcccgagcacat
cgcattggacagaagaagcctgtcactatctatcggcttgtctccaaagataccgtggaa
gaagaagtgcttgaacgtgctcgcaataagctgatgttggaattcataacaatccaacga
ggtgtcaccgacaaagacgctcgagagcttggtgaccgcatggctcgggctggcgcgagc
gtcgtggagccaacttcttccgatgacatttcgcgtatcttgaagaagcgaggccagaag
atgttcgagcagtcgggcaaccagcgcaagctcgaagagctggacattgacgcggtgctg
gagaatgctgaagagcacaagaccgagcaaccggaaggcatgaccacagacggtggcgaa
gagttcttgcgcagctttgaatacaccgacgtcaagatcgacctcgagtgggacgaaatt
attcccaaatcagaacttgacaagatcaaggacgaggagcgtaagaagcaagaggaggaa
taccttgagtctgtgatcgagcagaaccaaccacgcaagcgtaaggcagctgcaggtggt
gaggaaggccgagatcaacgcgctgcgaagaagcgggctcgcgaggccaatatgcagcac
atggacgaagaaggttctggcgacgacgattccgaccacggcgcggatccgaggcgaccc
cttggcgagaaggagtgccgacacctcatccgcgcatacgagcgctttggcgccttcgaa
gacaaacaagatgacatcattaaggaggctcgcttgatcggccgcgacatcaacattgtc
aaagatactctcaaagaagtcatcgatactgctattcgactgcagaaggaacacgcagac
caactggctgaagcagagcgcaccactggcaaggctgtgacgaagaaagagaagaaagcc
gtgctctttgacttccgcggtgtcaagcgtttgaatgcacagacactcactgagcggcca
gaggagatgcgcatgattcgcgactgcgtagatcagatctcggactggcgtaactttcga
gttcccgaggcttcgaagcctgcgtcatacacctgtgaatggggtgcgaaggaggatggc
atgctctgtgttggtattgctcgacatggatatggcgcatgggtgcctattcgggacgac
gaggagcttggtcttgcagacaagttctatttggaagagcaccgcgtcggagcaaaggag
gcccgtaacaaagaaggtgacgacaccaaggtggccaagtcgcctggcgccgttcatctg
gtccgccgcgccaactacctgctcagtgttcttcagcacaagacgagcaatggcacgaac
attgctgccaagaaggcgctggagaatcatcaccgcaataaccgcaagcatctgggccag
tttcacggtcgcatggctacaccaggcagcccagctccaggaggtattcgcaagcagcat
tcgagcgacggtaggagataccaccaatccgacattcgcaacagcggggaccgccgcaca
ccgcatgggtctcccaatggtcaccgagacgatcgctatcgcccgcgtcattcagaggaa
cgccggccccagcatcaaaggaatggaagctcgcatgcaaatggtacaccttcccgacca
ctgaccgagagcgagcagcgctgtcgcaagattctcgaccctatcagcgccacgcttgtc
aaggtttcaggtgctaccaagaagcgtattccggacgacgatgcacgcctcaagatgatc
aagctcggaattgttggcattggaacccacatcaattcgtacattcggcaacacgatgac
cgctcgttggaggacacgctctgggactatgtctctgagcaccactggccacagtcgaaa
gctgccgataagcgggtgccaggacacaagttacgggatatgtacaagaagattgctgga
aaagacagcgcagctggtggttccaagcccagt
DBGET
integrated database retrieval system