Pseudocercospora fijiensis: MYCFIDRAFT_133826
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Entry
MYCFIDRAFT_133826 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCFIDRAFT_133826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_133826
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MYCFIDRAFT_133826
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
MIOS_WD40
EpmC
WDR54
Motif
Other DBs
NCBI-GeneID:
19330870
NCBI-ProteinID:
XP_007925403
JGI:
133826
UniProt:
M3B630
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MNYQTGNATDIGNTYVHWMLDRRSKTSSIRGFEAERPTLSWTTSMLPPAARRGKAVDTIP
AKHLHSSFNKHRAPVNVVTWTPDGRRLVTGNTSGELTLWNGTGFNFETIFQAHADPIRAA
VYSHSDEWLISADQLGGVKYYQSNFNPVTEFDAHGDAVRDLAFSPNDSKFVTASDDASLK
IWDFASSQEESTLQGHQWDAKCVDWHPSKGLLVSGSKDHQIKLWDPRSGRCLTTLHGHKN
TVNMTKFEPSRGTLLASCARDQTVRIFDLHMMRDVFLLKGHEREVNSLVWHPFHSNLLTT
GAADGAMCHFLLDEQHPPPGTPLSVSPYDTPNPADTPAQTIYPAHKVAFAHEFNIWSMAW
HPMGHILASGSNDRATRFWTRPRPGEGSFQYDKWHIGQAAAEEKGTWSKKSERQAREEEE
DEQDDADGIEDQRMPNKGSFLPGLPGLPGLAPPMPPGFTPPGFPPPPQGYPPGFPPPPGL
PGFNATQPAASNGGGGGSVRKRAPLPSQADSLREEMKQGRYLKPR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcaaacaggaaacgccacggacatcggcaatacctatgtgcattggatgctc
gatagaagatcaaagacaagctcaatcaggggctttgaggctgaacgaccgaccttgagc
tggacaacttctatgcttcctcccgcagcacgaagaggaaaagcagtcgatacaataccc
gccaagcatcttcactcctcattcaacaaacaccgtgcccctgtaaatgtcgtgacatgg
acaccagacggacgccgactagtgacaggaaacacgagtggtgaattgacgctttggaat
ggaactggcttcaattttgagactatctttcaagcacatgcagatccgatccgagccgcc
gtctactctcatagcgacgagtggctcatttcggctgatcagcttggaggtgtcaagtat
taccaaagcaacttcaacccagtcacggaatttgatgcacatggcgatgctgtcagagat
ctcgccttttcgccgaacgactccaagtttgtaacagcttcagatgacgctagcttgaag
atttgggatttcgcgagcagtcaggaggaatcaacgcttcaaggtcatcagtgggatgca
aaatgcgtagattggcatccaagcaaaggattgctggtttccggctctaaagaccaccag
atcaagctatgggatccacgatctggcagatgtttaactacgctgcacggccacaagaac
acggtcaacatgacgaagtttgaacctagcagaggcactcttctcgcctcgtgtgctcga
gaccagacagtacgaatctttgaccttcacatgatgcgagacgtctttctgcttaagggg
cacgaaagagaagtcaactccctagtctggcatccgttccactccaatcttttgacgacc
ggagctgcagatggtgcgatgtgtcattttcttctagatgagcaacatcctccacctggc
acacctctctcagtctccccatacgatactcccaacccagcagataccccagcgcagacc
atttatcccgcacacaaagtggcgttcgcccacgaattcaatatctggagcatggcctgg
catccaatgggtcacatccttgcatcaggctccaacgatcgcgccactcgcttctggacc
cgtcctcgaccaggcgaaggcagcttccaatacgataagtggcatattggacaagctgcc
gcagaagagaaaggcacatggagcaagaagtccgaacgccaggcacgagaagaggaagaa
gacgagcaagacgacgcagatggaatcgaagaccaaagaatgccaaacaaaggctccttc
ctacctggactacctggactaccaggtcttgcacctccgatgccaccaggtttcactcca
ccaggatttccgcccccgccacaaggttatccgccaggcttcccaccgcctccaggcttg
ccagggttcaacgctacacaacctgctgctagcaatggcgggggaggaggcagtgtcagg
aaacgagcgcctcttccgtctcaggcagatagtttgagggaagagatgaagcaaggacgg
tatctgaagcctcgttag
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integrated database retrieval system