Pseudomonas frederiksbergensis: PFAS1_17770
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Entry
PFAS1_17770 CDS
T04786
Name
(GenBank) ATP-dependent DNA ligase
Organism
pfk
Pseudomonas frederiksbergensis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
APV41110
UniProt:
A0A1P8EY09
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Position
complement(3827590..3829278)
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AA seq
562 aa
AA seq
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MKAFADLYAELDATTSSNAKLAAMQRYFAEAAPEDAAWAVYFLSGGRPRQLVPVRILREL
AVEISGLSPWLFEESYQAVGDLAETISLVLPEALHRSNDGLAIWIEHKLLPLRGETPQVL
AERLPALWSQLDRQSLMLCIKLITGSFRVGVSKLLVTRALAAMAGLDSKRVAQRLVGYTD
LFNRPTASGYLKLIAAESSAEHAQRGGQPYPFFLAHALSQPVEQFEALLGPASHWQVEWK
WDGIRAQVVKRDGRLWVWSRGEELVTERFPEFDSLVHCLPDGTVIDGEIVAWKTDQITTE
DAFNPHAPAAPAVKPFALLQQRIGRKTLDKKILEEVPVVILAYDLLEWQGEDWRNQPQSR
RRTQLEHVVASGNNPALLLSPLLTGEDWFDLAQQRQASRKLGVEGMMLKARDALYGVGRT
KDMGVWWKWKVDPFSVDAVLIYAQRGHGRRASLYSDYTFAVWDGPPGASQRALVPFAKAY
SGLTDEEMRQVDSIVRKTTVEKFGPVSSVTPSLVFELGFEGIALSRRHKSGIAVRFPRML
RWRQDKSVEEADNLGTLQDLLG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctttgccgatttgtatgccgaactcgatgccaccacctcgagcaacgccaaa
ctggcggcgatgcaacgctacttcgccgaagccgcgccggaagatgccgcatgggctgtt
tactttttgtccggcgggcgtcctcggcaactggtgccggtacgcatcctgcgagagttg
gcggtggaaatctccggcctttcgccgtggctgttcgaagaaagttatcaagcggtcggt
gatctggcggaaaccatttcgctggtgctgcccgaagcgcttcaccgctccaacgatgga
ttggcgatctggattgaacacaaactgctgccgctacgcggtgaaaccccgcaagtcctc
gccgagcgactgcctgccctgtggtcgcaactggaccgtcagagcctgatgctctgcatc
aaactgatcaccggcagtttccgcgtcggcgtctccaagttactggtcacccgcgcctta
gcggccatggccgggctcgacagcaaacgcgtcgcccaacgtctggtgggttacaccgac
ctgttcaaccgcccgaccgcgtccggttacttgaagttgatcgccgccgaatcgtctgcc
gaacatgcgcaacggggcggtcagccctacccgtttttcctcgctcacgcgctatcacaa
cccgttgaacaattcgaagccctgctcggcccggccagccattggcaagtggaatggaaa
tgggacggcattcgcgcccaggtggtcaaacgcgacggtcgactgtgggtctggtcgcgg
ggtgaagagctggtcaccgagcgcttccccgaattcgatagcctggttcactgcttgccc
gacggcacggtgatcgacggtgaaatcgtcgcctggaaaaccgaccaaatcaccaccgag
gacgccttcaaccctcatgccccagcggcccccgcggtaaagcctttcgcgctgctgcaa
cagcggatcggtcgtaaaaccctggacaaaaaaatcctcgaagaagtgccggtggtgatc
ctcgcctacgacttgctggagtggcagggtgaagactggcgcaaccagcctcagtcccgg
cgtcgcacacaactggagcatgtcgtcgccagcggcaacaacccggcgttactcctttcc
cccctgctcaccggagaagactggttcgacctcgcccaacaacggcaagcgtcccgcaag
ctcggtgtcgaaggcatgatgctcaaggcccgggacgcgctgtatggcgttgggcggacc
aaggacatgggggtctggtggaaatggaaagtcgaccccttcagcgtcgacgcggtgctg
atttatgcgcaacgcggccatggtcgccgcgccagtctctacagcgattacaccttcgcc
gtgtgggacgggccgcctggcgcgagccaacgcgcactggtgccgttcgccaaggcgtat
tccgggctgaccgacgaagaaatgcgtcaggtcgacagcatcgtgcgcaagaccaccgta
gagaaattcgggccggtgagcagtgtcacaccgagcctggtgtttgaactgggtttcgag
ggcatcgccctgtccaggcgacacaagagcgggattgcggtgcggttcccgaggatgttg
cgttggcggcaggataagtcggtcgaggaagcggacaatttgggaacgttgcaggacttg
ctcggctga
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