KEGG   Pseudomonas frederiksbergensis: PFAS1_18405
Entry
PFAS1_18405       CDS       T04786                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PFAS1_18405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfk03400]
    PFAS1_18405
Enzymes [BR:pfk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     PFAS1_18405
DNA repair and recombination proteins [BR:pfk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PFAS1_18405
 Prokaryotic type
     PFAS1_18405
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: APV41232
UniProt: A0A1H4WR53
LinkDB
Position
3956757..3957452
AA seq 231 aa
MTADDRIKLEPSWKEALRAEFDQPYMAELRNFLQEERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPTHGCLQSWA
DQGVLMINTTMTVERANANAHKDKGWQFFTDRIIEVVSEHQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKYLEQNGETPIEWRLPPVA
NT seq 696 nt   +upstreamnt  +downstreamnt
atgactgcagacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgccgaa
ttcgaccagccctacatggcagagttgcgcaatttcctgcaagaggagcgcgcggcaggc
aaggaaatctacccgccaggaccgatgattttcaacgcgctcaattcgacgccgctggat
aaagtcaaagtcgtcatccttggccaggacccgtaccacggtccggggcaggcccacggc
ttgtgcttttcggtgcaaccaggcgtaccggcgccgccgtcgctggtgaacatctataaa
gagttgaaacgcgatctgaacatcgacatcccgacccacggttgcctgcaaagctgggct
gaccagggcgtgctgatgatcaataccaccatgaccgtggagcgcgccaacgccaatgcg
cacaaggacaagggctggcagtttttcaccgatcggatcatcgaagtggtcagtgaacat
cagccgcatctggtgtttatgctgtggggcgcccatgcccagagcaagcagaaactgatc
gatgccaccaaacacctggtgctgacgtcggtgcatccatcaccgctgtccgcctatcgc
ggcttccttgggtgcgggcacttcagtcgaaccaataaatatcttgagcagaatggcgag
acgccgatcgaatggcggttaccaccggtcgcgtaa

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