Pseudomonas protegens Pf-5: PFL_0162
Help
Entry
PFL_0162 CDS
T00249
Symbol
pgaB
Name
(GenBank) biofilm PGA synthesis lipoprotein PgaB
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
pfl
Pseudomonas protegens Pf-5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
GHL10
Motif
Other DBs
NCBI-ProteinID:
AAY95574
UniProt:
Q4KKC4
LinkDB
All DBs
Position
190642..192639
Genome browser
AA seq
665 aa
AA seq
DB search
MRLINRCILLLGALVLSACSQPAADFLAPAQRPLPNTEAPWPKNHVLGIAYHDIEDRDPD
QRVVAVRTERMIEQLAWLRENGYRPVTVDQILAARNGGPELPAKAILLTFDDGYSSFYTR
VLPVLRSYHWPAVLAPVGTWIDTPADQPVNFAGELRPRSQFLTWAQVREISRSGLVEIAA
HTDHSHLGILANPQGNLQPAAATRRFDAASGRYESEADFQARMRQDVTAISNKILAVAGY
RPRIWVWPYGTADGSTLQVVDSQGFKLALTLDDGLDTLDNLMSSPRFLVVSDPDGMHFSN
SIVGAETAAPMRVVHVDLDNVYDPDPKQQEVNLGKLVQRMADLGANTVFLQAFADPKGDG
LVQSLYFPNRHLPMRADLFDRVAWQLRTRAHVKVYAWMPVLSFALDARLPRVTRWDPATG
QSTIDPKQYQRLSPFDPTVRRQIGDLYEDVARMTSVDGILFHDDAVLSDFEDASPGALRA
YAAQGLPGSMAALRDDPATLQRWTRFKSRYLIDFTHELAAKVRAIRGPQVQTARNLFAEP
IINPQSETWFAQNLDDFLVSYDWTAPMAMPLMEGQSQRHSGPWLEALVDQVRARPGALQR
TVFELQARDWARKPASDLSAQQLADWMGRLKRQGATNFGYYPDNFLENSPDLKTLRPALS
NKWSP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatcaaccgttgcatcctcctgctgggagccctggttctcagtgcctgttcc
cagcccgccgccgactttctcgccccggcgcaacggccgttgcccaacaccgaggcgccc
tggccgaagaaccacgtgctgggcattgcctaccacgacatcgaggatcgcgacccggac
caacgggtggtggcggtgcgcaccgagcggatgatcgagcaactggcctggttgcgggaa
aacggctaccggcccgtgaccgtggaccagatcctggcggcgcgcaacggcggccccgaa
ctgccggccaaggccatcctgctgaccttcgatgacggctattcgagcttctacacccgg
gtgctgccggtgctgcgcagctatcactggcctgcggtgctggcgccggtgggcacctgg
atcgacaccccggccgaccagccggtgaacttcgccggcgagctgcggccccgctctcag
ttcctgacctgggcgcaggtccgggaaatctcccgttccgggctggtggaaatcgccgcc
cataccgaccacagccacctgggcattcttgccaaccctcagggcaacctgcagccggcg
gcggcgacccgccgttttgatgccgcctccgggcgctatgaaagcgaggcggatttccag
gcgcggatgcgccaggacgtgaccgccatctcgaacaagatcctggccgtggccggctat
cgcccgcggatctgggtctggccctacggcacggccgacggctccaccctgcaagtggtg
gacagccagggcttcaagctggccctgaccctggacgacggcctggacacactcgacaac
ctgatgagcagcccgcgtttcctggtggtgtcggacccggacggcatgcacttctccaac
agcattgtcggtgccgagaccgccgcgcccatgcgcgtggtgcacgtggacctggacaac
gtctacgacccggaccccaagcagcaggaggtcaacctcggcaagctggtgcagcgcatg
gccgacctgggggccaacaccgtattcctccaggccttcgccgaccccaagggcgacggc
ctggtgcagtcgctgtatttccccaaccggcacctgccgatgcgcgccgacctgttcgac
cgggtcgcctggcagttgcgcacccgggcccacgtcaaggtctatgcctggatgccggtg
ctcagcttcgccctggacgcccggctgccccgggtcacgcgctgggatccggccaccggc
cagagcaccatcgatcctaagcagtaccagcggctgtcgcccttcgaccccactgtgcgc
cggcagatcggcgacctctacgaggacgtggcgcgcatgacgtcggtggacggcattctg
ttccacgacgacgccgtgctctcggatttcgaagacgccagccccggggccttgcgcgcc
tatgcggcccagggcctgccgggttccatggccgccctgcgcgacgatccggccaccctg
cagcgctggacccgcttcaagagccgctacctgatcgacttcacccatgagctcgccgcc
aaggtccgggcgattcgcgggccgcaggtgcagaccgcgcgcaacctgttcgccgagccg
atcatcaacccgcagagtgaaacctggttcgcccagaacctcgatgatttcctggtcagc
tacgactggaccgcgcccatggccatgccgctgatggaaggccagagccagcggcattcc
gggccctggctcgaagccttggtggaccaggtgcgcgcccgccccggtgccttgcagcgc
acggtgttcgagctgcaggcccgggactgggcccgcaagcccgccagcgacctctccgcc
cagcaactggcggactggatgggccgcctcaagcgccagggcgcgaccaatttcggctac
tacccggacaacttcctcgagaactcaccggacctgaagactctgcggcccgcgctctcc
aacaaatggagcccttga
DBGET
integrated database retrieval system
