Pseudomonas protegens Pf-5: PFL_0893
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Entry
PFL_0893 CDS
T00249
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00970
Aminoacyl-tRNA biosynthesis
pfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFL_0893 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pfl03029
]
PFL_0893 (gatB)
Enzymes [BR:
pfl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
PFL_0893 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
PFL_0893 (gatB)
Mitochondrial biogenesis [BR:
pfl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PFL_0893 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AAY90180
UniProt:
Q4KIA9
LinkDB
All DBs
Position
complement(1036141..1037586)
Genome browser
AA seq
481 aa
AA seq
DB search
MQWEVVIGLEIHTQLTTQSKIFSGSSTAFGAEPNTQASLIDLGMPGVLPVLNQEAVRMAV
MFGLAVDAEIGQHNVFARKNYFYPDLPKGYQISQMELPIVGKGHLDIPLEDGTMKRVGIT
RAHLEEDAGKSLHEEFNGATGIDLNRAGTPLLEIVSEPDMRSAKEAVAYVKSIHALVRYL
GICDGNMAEGSLRCDCNVSIRPKGQVEFGTRCEIKNVNSFRFIEKAINSEIRRQIELIED
GGKVIQQTRLYDPNKDETRPMRSKEEANDYRYFPDPDLLPVVIEDSFLDQVRATLPELPP
QKRERFQEQFGLSVYDASVLATSREQADYFEKVASIAGDAKLAANWVMVELGSLLNKQGL
EIDEAPVSAEQLGGMLLRIKDNTISGKIAKTVFEAMANGEGNADEIIDKRGLKQVTDSGA
ISAVLDEMLAANAEQVEQYRAADEAKRGKMFGFFVGQAMKASKGKANPQQVNELLKSKLE
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgggaagtcgtgatcgggctggagattcatacccagctcaccactcaatcgaag
attttctccggtagctccaccgccttcggtgccgagcccaacacccaggccagcctgatc
gacctgggcatgcccggcgtgctgccagtgctgaaccaggaagcggtgcgcatggcggtg
atgttcggcctcgcggttgacgccgagatcggccagcacaacgtgtttgcccgcaagaac
tacttctacccggacctgcccaagggctaccagatcagccagatggagttgccgatcgtc
ggcaagggccacctggacatccccctggaagacggcaccatgaaacgcgtcgggatcacc
cgcgcgcacctggaagaagacgccggcaagagcctgcacgaagagttcaacggcgccacc
ggcatcgacctgaaccgtgccggcacgccgctgctggaaatcgtttccgagcctgacatg
cgcagcgccaaggaagccgtggcctacgtcaagtcgatccacgccctggtgcgctacctg
ggcatctgcgacggcaacatggccgagggctccctgcgttgcgactgcaacgtgtcgatc
cgccccaagggccaggtcgagttcggcacccgctgcgagatcaagaacgtcaactcgttc
cgcttcatcgagaaggcgatcaacagcgagatccgtcgccagatcgagctgatcgaggac
ggtggcaaggtgatccagcagacccgcctgtacgacccgaacaaggacgagacccgtccg
atgcgcagcaaggaagaagccaacgactaccgttacttccccgatccggacctgctgccc
gtggtcatcgaggattccttcctcgaccaggtacgcgccaccctgcctgagctgccacca
cagaaacgcgagcgcttccaggagcagttcggcctgtcggtctacgacgccagcgtactg
gccaccagccgtgagcaggcggactacttcgagaaggtcgccagcatcgccggtgacgcc
aagctcgccgccaactgggtcatggtcgagctgggcagcctgctgaacaagcagggcctg
gaaatcgacgaagccccggtctcggccgaacaactgggcggcatgctgttgcggatcaag
gacaacaccatctccggcaagatcgccaagaccgtgttcgaagccatggccaatggcgaa
ggcaatgccgacgagatcatcgacaagcgtggcctcaagcaagtcaccgacagcggcgcg
atctctgcggtgctcgatgagatgctcgcagccaacgccgaacaggtcgaacagtaccgt
gccgccgatgaggccaagcgcggcaagatgttcggcttcttcgtcggccaggcgatgaaa
gcatccaaaggcaaggccaacccgcaacaggtcaacgagctgctgaagagcaagctcgag
ggctga
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