Pseudomonas protegens Pf-5: PFL_6036
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Entry
PFL_6036 CDS
T00249
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00470
D-Amino acid metabolism
pfl01100
Metabolic pathways
pfl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFL_6036 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PFL_6036 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
PFL_6036 (alr)
Enzymes [BR:
pfl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PFL_6036 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfl01011
]
Precursor biosynthesis
Racemase
PFL_6036 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AAY95225
UniProt:
Q4K3T9
LinkDB
All DBs
Position
complement(6858433..6859506)
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AA seq
357 aa
AA seq
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MRPARALIDLQALRHNYQLARETSGVRALAVIKADAYGHGAVRCAQALEGEADGFAVACI
EEALELRAAGIRAPVLLLEGFFEASELALIVEHDFWCVVHSLWQLEAIEQAAVAKPLTVW
LKLDSGMHRVGLHPKDYQVAYQRLQASGKVEKIVLMSHFARADELDCPRSSEQVAVFEAA
RQGLGAEISLRNSPAVMGWPSVPSDWVRPGIMLYGSTPFEENNSVAARLQPVMTLESKVI
CVRELPAGEPVGYGARFITDRPMRIGVVAMGYADGYPRHAPTGTPVLVAGQRSRLLGRVS
MDMLCVDLTDVPQAGLGSTVELWGKNILASDVAQAADTIPYQLFCNLRRVPLVYCEG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgcccgtgccctgatcgatctccaagccctgcgtcacaactaccaactggcc
cgtgaaacctcgggagttcgtgctctcgcggtgatcaaggccgatgcctatggccatggc
gcggtgcgctgcgcccaggcgctggaaggcgaggccgacggtttcgccgtggcctgcatc
gaagaagccctggagctgcgcgccgcgggcattcgtgcgccggtgctgctgctggaaggt
tttttcgaagcatccgagctggcgctgatcgtcgagcatgatttctggtgcgtggtgcat
tcgctgtggcaactcgaagccatcgagcaggcggccgtggccaagccactgacggtctgg
ctcaagctggactcgggcatgcatcgggtcggcctgcatcccaaggattaccaggtggcg
tatcagcgcctgcaggccagcggcaaggtcgagaagatcgtgctgatgagccactttgcc
cgcgccgatgaactggactgtccgcgtagcagcgagcaggtggcggtattcgaagcggct
cgccagggcctcggagcggaaatcagcctgcgcaattcgccggcggtcatgggctggccc
agcgtacccagcgattgggtgcgcccgggcatcatgctctacggttcgacgccgttcgaa
gaaaacaactcggtggccgcgcgcttgcagccggtaatgaccctggagtccaaggtgatc
tgcgtgcgtgaactgccggccggcgagccggtgggctacggcgccaggttcatcaccgac
aggccaatgcgcatcggcgtggtggccatggggtatgccgacggttatccgcgccatgcg
cctactggtacgccggtactggtggccggccagcgcagccgcctgctgggccgggtgtcc
atggacatgctgtgtgtcgacctgacggacgtgccccaggccggtcttggttcgaccgtg
gaattgtggggcaagaacatcctcgccagcgatgttgcgcaggccgccgataccatccct
tatcagctgttctgcaacctgcgccgggtaccgttggtgtactgcgaaggctga
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