Pseudomonas protegens Pf-5: PFL_6229
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Entry
PFL_6229 CDS
T00249
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pfl
Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfl03016
]
PFL_6229 (trmE)
Transfer RNA biogenesis [BR:
pfl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PFL_6229 (trmE)
Prokaryotic type
Methyltransferases
PFL_6229 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
AAA_28
Roc
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAY95417
UniProt:
Q4K396
LinkDB
All DBs
Position
complement(7070484..7071854)
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AA seq
456 aa
AA seq
DB search
MNVPRETIAAIATAQGRGGVGIVRISGPLAGAAAKAISGRELKPRFAHYGPFLSEQEEVL
DEGIVLYFPGPNSFTGEDVLELQGHGGPIVLDMLLQRCLELGCRLARPGEFSERAFLNDK
LDLAQAEAIADLIEASSAQAARNALRSLQGAFSQRVYNLTEQLIALRIYVEAAIDFPEEE
IDFLADGHVLSMLDAVRDELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDILREHIHIDGMPLHVVDTAGLRDTEDQVEKIGVERALKAISEADRVL
LVVDATAAEAADPFALWPEFLEQRPDPAKVTLIRNKADLTGEPIALETCDDGHVTISLSA
MAAGSGLELLRDHLKACMGYEQTSESSFSARRRHLEALHYASAALEHGRAQLTLAGAGEL
LAEDLRQAQQSLGEITGAFSSDDLLGRIFSSFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccctcgtgaaaccatcgctgccattgctaccgcccagggccgcggcggcgtg
ggtatcgtacggatttccgggcccctggcgggcgcggcagccaaagccatcagcggccgt
gagctgaagccgcggtttgcccattacgggccgtttctcagtgagcaagaagaagtcctg
gatgaggggattgtcctgtatttccccgggccgaactccttcaccggcgaagacgtgctg
gaactgcagggccacggcggcccgattgttctcgacatgctgctgcagcgctgcctggaa
ctgggctgccgcctggctcggccgggggaattcagcgagcgtgcgttcctcaacgacaaa
ctggacctggcccaggccgaagccattgccgacctgatcgaggccagttcggcacaggct
gcgcgcaatgccctgcgttcgttgcaaggggcgttctcccagcgtgtgtataacttgacc
gagcaactgatcgccctgcggatctatgtcgaagcggcgatcgattttcccgaggaagaa
atcgacttccttgccgatggccatgtgttgagcatgctcgatgcggtgcgtgacgagtta
tccacagtactgcgtgaagctgggcagggcgccttgctgcgcgatggcatgaccgtggtg
atcgccgggcgcccaaatgccggcaaatccagcctgctcaacgccctggccgggcgcgag
gctgccattgtcaccgatatcgccggcaccactcgggacatcctgcgcgaacatatccac
atcgacggcatgccgttgcacgtggtggacaccgcagggctgcgggacaccgaggaccag
gtggaaaagatcggtgtcgaacgggccctcaaggccatcagcgaggccgaccgggtgttg
ctggtggtggacgccaccgcggcggaagcagcggaccccttcgccctgtggccggagttt
ctcgaacagcgaccagacccggccaaggtcacgctgattcgcaacaaggccgatctgacc
ggtgaacccattgccctggaaacctgtgacgatggccatgtcaccatcagcctcagtgcc
atggccgcgggtagcgggctggaactgctgcgtgaccacctgaaagcctgcatgggctat
gaacagacgtccgaaagcagcttcagtgcgcgccgccggcacttggaggcattgcactac
gccagtgccgccctggaacatggccgggcacagttgaccctggcaggtgccggcgaactg
ctggccgaggacttgcgccaggctcagcaatcgctgggggaaatcaccggggccttcagt
tccgatgacctgctggggcggatcttttccagcttctgcatcggcaagtaa
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