Perca flavescens (yellow perch): 114552764
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Entry
114552764 CDS
T07494
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114552764 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflv03019
]
114552764 (exosc5)
Messenger RNA biogenesis [BR:
pflv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114552764 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114552764
NCBI-ProteinID:
XP_028429602
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Position
3:complement(10011113..10018535)
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AA seq
220 aa
AA seq
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MMEVCGSSNVTLREFGSEQSLLSRPDGSASFIQGNTSVLAAAYGPAEVKVSKEIYDRATL
EVLIQPKVGLPGVRERAQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSLLSCFLNA
ACVALMDAGLPMSRLFCGVTCAIDADGQIITDPTAAQEKESRALMTFAIDATERRVMMSS
TRGSFSVHELQQCIAVSQKASEKIFQFYRDSVRRRYSKTL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtgtgcggctcttcaaatgtcactctgagagagtttggcagtgaacagagc
ctactgtctcgacccgacggttcagcttccttcatacaaggaaacacaagtgtgttggct
gcagcgtacggaccagcggaggtcaaagtcagtaaggaaatctatgaccgggcaacactg
gaggtgttgatacagcccaaagtgggactgccaggcgtaagggagcgagcgcaagagcaa
tgtgtgcgggaaacctgtgaggcatctctgctcttgtcccttcaccctcgctcctccctc
actctcattcttcagctgatacatgatgacggctcactcctgtcctgctttttgaacgct
gcctgtgtggctctgatggacgcgggcctgcccatgagtcgcctgttctgcggggtgacc
tgtgccatcgacgcagacggtcaaatcatcacagaccccaccgcagctcaggaaaaggaa
agtcgagcgttgatgacctttgccattgacgccacagaacgccgagtgatgatgtcatca
accagaggatcattttccgttcacgagctgcagcagtgtatagcagtcagtcagaaagca
tcagagaagatcttccagttctacagagactcagtccgccggcgatactccaaaaccctc
tga
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