KEGG   Perca flavescens (yellow perch): 114552764
Entry
114552764         CDS       T07494                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
pflv  Perca flavescens (yellow perch)
Pathway
pflv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pflv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114552764 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pflv03019]
    114552764 (exosc5)
Messenger RNA biogenesis [BR:pflv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114552764 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 114552764
NCBI-ProteinID: XP_028429602
LinkDB
Position
3:complement(10011113..10018535)
AA seq 220 aa
MMEVCGSSNVTLREFGSEQSLLSRPDGSASFIQGNTSVLAAAYGPAEVKVSKEIYDRATL
EVLIQPKVGLPGVRERAQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSLLSCFLNA
ACVALMDAGLPMSRLFCGVTCAIDADGQIITDPTAAQEKESRALMTFAIDATERRVMMSS
TRGSFSVHELQQCIAVSQKASEKIFQFYRDSVRRRYSKTL
NT seq 663 nt   +upstreamnt  +downstreamnt
atgatggaagtgtgcggctcttcaaatgtcactctgagagagtttggcagtgaacagagc
ctactgtctcgacccgacggttcagcttccttcatacaaggaaacacaagtgtgttggct
gcagcgtacggaccagcggaggtcaaagtcagtaaggaaatctatgaccgggcaacactg
gaggtgttgatacagcccaaagtgggactgccaggcgtaagggagcgagcgcaagagcaa
tgtgtgcgggaaacctgtgaggcatctctgctcttgtcccttcaccctcgctcctccctc
actctcattcttcagctgatacatgatgacggctcactcctgtcctgctttttgaacgct
gcctgtgtggctctgatggacgcgggcctgcccatgagtcgcctgttctgcggggtgacc
tgtgccatcgacgcagacggtcaaatcatcacagaccccaccgcagctcaggaaaaggaa
agtcgagcgttgatgacctttgccattgacgccacagaacgccgagtgatgatgtcatca
accagaggatcattttccgttcacgagctgcagcagtgtatagcagtcagtcagaaagca
tcagagaagatcttccagttctacagagactcagtccgccggcgatactccaaaaccctc
tga

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