Perca flavescens (yellow perch): 114559550
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Entry
114559550 CDS
T07494
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pflv
Perca flavescens (yellow perch)
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflv03000
]
114559550
03036 Chromosome and associated proteins [BR:
pflv03036
]
114559550
Transcription factors [BR:
pflv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114559550
Chromosome and associated proteins [BR:
pflv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114559550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
114559550
NCBI-ProteinID:
XP_028440049
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Position
8:1949791..1962143
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AA seq
862 aa
AA seq
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MKTVNLSLLFQFLPRMDGGPTEGVGVVEVPGKDFPSIQAVHSQDAMVADLLQQAAEAGGM
VEGQAGVLLEQGHGDGMVTATQAQQQLMEAGVGVGVDGGAGVEMMVMDSLDPTLLQMKTE
VIDAAVGGATTVGVVGGVAGGAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVP
VSATTVEALQQGTFVDTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEGGEA
HPEEEEDEEVGTQLMEEGEDEPIHPTNDDSNWAKDPDYQPPSGTIKKTKKGKKSRLRYAE
GDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCP
RRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGE
LVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKR
HMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL
RKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRT
HTGEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAEN
CNGEVEDAENGAPTPKKGKRGRKRKMRSRRDEDDSEEDHAELDEEEEDDDGEGEGEEDAS
LLQEEEEPENMELDQAPAAIPVPAPDEPPVKRKRGRPPKNAPKTPTPSKSVRVAAKAAAS
AAAIIQVEDESTGAVENIIVKKEDSDVSAVTPLDQGMALTVEGVGLDGEGVETVELAVNE
ETAAAAANGDLTPEMILSMMDR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtcaatttatcgttgttattccagttcctaccgagaatggacggagggcca
acagagggtgtaggtgtggtggaggtccccggcaaagactttccctccatccaggccgtt
cacagccaggatgccatggtggctgacctcctccagcaagctgcagaggccgggggcatg
gtagagggacaagcaggagtcctcctggaacaaggtcacggggacggaatggtaacagcc
acccaggcccagcagcagctgatggaagctggggttggggttggtgtggatggtggagca
ggggttgaaatgatggttatggactcactggatcccaccctgttgcagatgaagactgag
gtgatcgatgctgcagtggggggagcaacgactgtgggtgttgttggaggggtagcgggt
ggcgctcaccaagcaactgtaacaacagtggaccagactcaaatcatcacactacaggtg
gtaaacatggaggagcaggcagctctgggtctgggggagctgcagctggtccaggtgcct
gtttctgccaccactgtggaggccctgcagcaaggcacctttgtagacaccactgctatg
ccaaaggacggagacccagtcatctgccacaccttgccgctgccggagggctttcaggta
gttaaggttggcgctaatggggaggtggagacagtagagcaggaggagggaggagaagcc
caccctgaagaggaggaagatgaggaggtggggacccagctgatggaagaaggggaggat
gaacccattcatcctactaatgacgactcaaactgggctaaagacccggactatcagccc
ccaagtggaactatcaagaagaccaagaagggtaaaaagagtcgcctgcgttatgctgaa
ggagataaggacatggatgtcagtgtctatgactttgaagaggaacaacaggagggcctt
ctgtctgaggtcaatgctgagaaagtggtgggcaacatgaaaccacccaaacccaccaag
atcaagaagaaaggagtgaagaagacatttcagtgtgagctgtgtagctacacgtgccct
cgacgctccaacctggacagacacatgaagagccacacagacgagagacctcacaaatgt
cacctgtgtggaagagccttcaggacggtcaccctgctaagaaaccatctcaatacacac
actggaactcgtccacacaagtgcacagactgcgatatggcttttgtgaccagtggagag
ttggttcgtcatcgtcgctacaagcacacgcatgagaaacccttcaaatgctccatgtgt
gactacgccagtgtggaggtgagcaaattaaagcgtcacattcgttcccacaccggtgag
cgtccattccagtgcagtctttgcagctacgccagcagagacacgtacaagctgaagaga
cacatgaggacacactcaggagagaaaccttatgagtgctacatctgccatgccagattc
acccagagtggaaccatgaagatgcacattctgcagaaacacacagagaatgtggccaaa
ttccactgtccgcactgtgacactgtcatcgcacgcaagagtgacttaggtgtccatctt
cgtaagcagcactcattcattgagactggaaagaagtgtcgttactgcgacgcggttttc
cacgagcgctatgctctgatccagcatcagaaatcccataagaatgagaagaggtttaaa
tgtgacatgtgcgactactgctgccgccaggagcgccatatggtcatgcatcgtcgaacc
catacaggagagaaaccgtatgcctgcagccagtgtgagaagaccttcagacagaagcag
ctgctggacatgcacttcaaacgctaccacgaccccaactttgtccccaccgcctttgtc
tgccccaagtgtagcaagaccttcactcgcaggaacaccatggctcgccacgctgagaac
tgcaatggtgaagtggaggatgctgagaacggagctccaaccccaaagaaaggaaagaga
ggaagaaagaggaagatgaggagcaggagagatgaggatgacagcgaggaggaccacgct
gaactggacgaggaggaggaggacgacgacggtgagggtgaaggtgaggaagatgcatcg
ctcctacaggaagaggaggagccagaaaacatggaactggaccaggcgcctgccgccatc
ccagtaccggctcccgatgagccaccggtcaagaggaaacgaggccgaccccctaagaac
gcccccaagactccaacacccagcaaatcagtcagggtggctgccaaggcggctgcttct
gctgctgccatcatccaggtggaggatgagagcaccggagcagtggagaacatcatagtg
aagaaggaggatagcgacgtctctgcggtgactcctctggatcagggcatggccctgacc
gtggagggtgtggggctggacggggaaggggtggagactgttgagctggctgtgaacgag
gaaacagcggctgccgccgccaacggagacctgacgccagagatgatcctcagcatgatg
gaccggtga
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