Perca flavescens (yellow perch): 114572187
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Entry
114572187 CDS
T07494
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pflv
Perca flavescens (yellow perch)
Pathway
pflv04141
Protein processing in endoplasmic reticulum
pflv04210
Apoptosis
pflv04217
Necroptosis
pflv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114572187
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
114572187
04217 Necroptosis
114572187
04218 Cellular senescence
114572187
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pflv01002
]
114572187
Enzymes [BR:
pflv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
114572187
Peptidases and inhibitors [BR:
pflv01002
]
Cysteine peptidases
Family C2: calpain family
114572187
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
114572187
NCBI-ProteinID:
XP_028459476
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All DBs
Position
17:13555840..13565926
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AA seq
704 aa
AA seq
DB search
MYPSGGISATIHANRLRAEGMGSKEQALHFSNQDYEALKQECLDSGCLFEDPCFPAEPPS
LGFKELAPYSSKTRDVEWKRPTELTDDPQFIVGGATRTDICQGALGDCWLLAAIASLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGEIMFVHSAEGNEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPKDLHRIIGKALDRGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLKEVDFRGNMERLIRIRNPWGQVEWTGAW
SDNSPEWDEVDPSEREDLHLQMEDGEFWMSFSEFKRQFSRLEICNLTPDALSEDSLGHWN
TMKFYGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALMQKDRR
RYRRHGQDMHTIGFALYEIPEEYRGCQNVHLKKDFFLKHSSCARSETFINLREVSTRLRL
PPGEYLVVPSTFEPSKEADFVLRVFTEKQSETEELDEEISADLGDDDEITEDDIDDSFKS
MFAQLAGEDMEISIQELRTILNRVLSRHKDLKTDGFSVESCRTMVNLMDKDGSARLGLVE
FQILWNKIRKWLVIFRDFDLDKSGAMSSYEMRLAVEAAGFKLNNRLNQILVARYAENEMI
DFDNFICCLVKLEAMFRYFQQFDKEGSGEAEMNISEWLYLTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaagtggagggatatctgcaaccatacacgccaacaggctgcgggcagaaggc
atgggctccaaggagcaggctttgcacttctccaaccaggactacgaggccctgaagcag
gaatgtttggactccggctgcctgtttgaagacccctgtttccccgctgagcctccatcc
ctgggcttcaaggagctcgccccctattcctccaaaactagggatgtggagtggaagagg
cctacagaactgacggatgaccctcagttcattgttggtggtgccaccagaacggacatc
tgtcagggagccctgggtgactgctggctcttggcagccatcgcctctctcaccctgaat
gagaggcttcttcatcgggttgtcccacatgggcagtccttccaagatgactatgctgga
atcttccactttcagttctggcagtttggcgaatgggtagatgtcgtgatagatgacaga
ctgcctgtcaaagatggggagatcatgtttgtccattctgctgagggcaatgaattctgg
agtgcactcctggagaaggcttatgccaagttgaatggctcttatgaggctctgtccgga
gggagcaccactgaaggctttgaggacttcacagggggtgtgtctgagatgtacgagctc
cgcaaggcacccaaagatctccacaggataattggcaaagccctggacagaggctctctg
ctgggttgctctatcgatatcaccagtgccttcgacatggaggctgttacattcaagaag
cttgtgaagggccacgcgtactcagtcactggactgaaagaggttgatttccgcggcaac
atggaacgcctaatccgaatacgtaacccttggggacaggtggagtggactggtgcctgg
agtgataattcccccgaatgggatgaggttgacccttctgaacgagaagacctgcatctt
cagatggaagacggggagttttggatgtcgttcagtgaattcaagaggcagttttctcgg
ctagagatctgtaacttgactcctgatgctctaagtgaagacagtctcggccattggaac
accatgaagttctacggcgcgtggaggagaggcagcaccgctggaggctgcaggaaccac
cccaacacattttggatcaacccccagtacaagatcacgttgctggaggaggatgatgac
ccagaggacgatgaggtggcgtgcagttttttagtagctctcatgcagaaggaccgccgc
aggtatcggcgccatggtcaggacatgcacaccattggctttgctctttatgagattcca
gaagagtacagaggctgccagaatgtccatttgaagaaagatttctttttgaaacattca
tcgtgcgctcgctctgagaccttcatcaacctgcgagaggtgagcacacggcttcgtctg
ccccccggagagtacctcgtcgtcccctccacctttgaacccagtaaggaggctgacttt
gtcctgagagtcttcactgagaagcaatcagaaacagaagaactggatgaagaaatctct
gccgatttaggagatgatgatgaaataactgaagacgacattgatgactcttttaagtcc
atgttcgcccagctagcaggagaggacatggagatttctattcaggagcttcggaccatt
ctaaaccgagtcctctcccgccacaaagatctgaagactgatggcttcagtgtggaatca
tgcaggaccatggtcaacctgatggataaagatggtagtgcccgtttagggctggtggag
tttcagattctctggaacaagatccgaaagtggctggtaatttttagggattttgacctc
gacaagtcaggggccatgagctcatatgagatgcgtcttgctgtggaggcagcaggtttt
aaattgaataacagactgaaccagattctggtagcccggtatgcagagaacgagatgatt
gactttgacaatttcatctgctgcttggtcaagcttgaagccatgtttaggtatttccag
caattcgacaaggagggatcaggagaggctgagatgaacatcagcgagtggctttacctg
acaatgtgtggttga
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