Pyrolobus fumarii: Pyrfu_0578
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Entry
Pyrfu_0578 CDS
T01620
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pfm02048
]
Pyrfu_0578
Enzymes [BR:
pfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Pyrfu_0578
Prokaryotic defense system [BR:
pfm02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Pyrfu_0578
Subtype I-B factors
Pyrfu_0578
Subtype I-C factors
Pyrfu_0578
Subtype I-D factors
Pyrfu_0578
Type II CRISPR-Cas system
Subtype II-B factors
Pyrfu_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
PDDEXK_3
Dna2
Motif
Other DBs
NCBI-ProteinID:
AEM38448
UniProt:
G0EGZ8
LinkDB
All DBs
Position
532183..532806
Genome browser
AA seq
207 aa
AA seq
DB search
MKGVPRILAVVYRAKERDFAEKLEEATREDIVYVTDLTSCSQKRVFRLSMPLLSFRFEPA
MLLGELVHRGLEAILEEEGWATEMEVVKRFEIDGEVYELRGRVDAALVTEDGVEEVVEIK
TARSVEKPLEHHVLQLQVYMTLLGAKRGTLVYVTPDRVVEYAVGPREVDVEQLVRETVHN
LARPRFDWECRYCPYRRYCPYVRSQEH
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggcgtgcctcgcatcctcgcggtcgtctaccgggctaaggagagggacttcgcg
gagaagctggaggaggctacgcgcgaggacatagtgtacgtgacggatctcacctcgtgt
agccagaagagggtcttccgcctcagcatgccgctgctctcattccgcttcgagccggcc
atgctcctcggggagcttgtgcaccgtggcctcgaggctatactcgaggaggagggctgg
gcaaccgaaatggaggtcgtgaagcgcttcgagatagacggggaggtttacgagctccgt
gggcgtgtcgacgctgcactagtcacggaggatggcgtggaggaggtcgtggagataaag
actgctaggagcgtcgagaagcccctggagcatcacgttctccagctccaggtttacatg
acgctactgggcgccaagcgggggacgctagtctacgtgacgccggatagggtggtggag
tatgctgttgggccccgcgaggttgacgtggagcagcttgtgagggagactgtccacaac
ctggcgcgacccaggttcgactgggagtgccgctactgcccgtaccgcaggtactgccca
tacgtgaggagccaggagcactag
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