KEGG   Pseudomonas fluorescens UK4: HZ99_19275
Entry
HZ99_19275        CDS       T03319                                 
Name
(GenBank) conjugal transfer protein TrbE
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
pfn  Pseudomonas fluorescens UK4
Pathway
pfn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HZ99_19275
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfn02044]
    HZ99_19275
Enzymes [BR:pfn01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HZ99_19275
Secretion system [BR:pfn02044]
 Type IV secretion system
  Trb secretion system protein
   HZ99_19275
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG HerA_C AAA_10 AAA_22 TraG-D_C CbiA AAA_16 FtsK_SpoIIIE T2SSE Zot NACHT DUF87
Other DBs
NCBI-ProteinID: AIG04216
UniProt: A0A379I5Q4
LinkDB
Position
4215921..4218374
AA seq 817 aa
MLNLAEYRQRPALLADWLPWAGLVAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSA
RLNNALRRLGSGWALFIEAERSAAADYPHSEFPEALSWLVDEERRSAFEDTGHHFESGYH
LTLVYLPPEESRARAAKMLYENTPTNGVDWRERLQAFVAETDRVFDQLDGVMPEIAWLDD
AQTLTYLHATISTRRYRVGVPEVPFHIDALLADSPLVGGLAPMLGDRHLRVVSVRGFPTS
TWPGILDDLNRLGFAYRWSTRFLCMDKSEAEKDLARLRRQWFAKRKNVIALLRETIFQQE
SPLVDTDASNKATDADAALQELGSDQVAFGYLTATVTVLDADPAAADEKLRMVERVIQGR
GFVTISETLNAVDAWLSSLPGNAYANVRQPIVSTLNLAHMMPVSAVWAGPERNAHLDGPP
LIVTRTDGATPFRLVTHDGDVGHMLVAGPTGMGKSVLLATLAMQFRRYLGSRIFAFDMGR
SMRATILGLGGEHYDLGTDGEIAFQPLARIDREGYRTWAAEWIEGRLLHEGVAVGPDEKA
AIWSALGSLAGAPVEQRTMTGLSVLLQSNALRQALAPYVLGGAHGKLLDADHDRLGMADV
QGFEMEELMHSKAAVMAVLHYLFARFDERFDGAPTMLILDEAWLFLDDPVFAARIRQWLK
TLRKKNVSVIFATQSLADIKDSSIAPAIIESCASRIFLPNPQATEPQIRTIYEGFGLNSR
QIEIVATAQPKRDYYYQSRLGNRLFDLDLGAATLAFAGASTPQDQRDIDRVLLDAGTPGF
AGAWLRHRGLDWAADLLPSFPGLAPDSLADQPQEILP
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgctgaacctcgccgaataccgccagcgcccggccttgctcgccgattggctgccgtgg
gccgggctcgtcgcgccgggtgtcgtcttgaacaaggacggcagtttccagcgcacggcc
cggtttcgcgggcctgacctcgacagtgccacgcaaggcgagctgatcgccacgtcggcc
cgcttgaacaatgcgctgcgccggctgggatcgggctgggcgctgttcatcgaggccgaa
cgcagcgccgccgcggactacccgcactcagagtttccggaggcgctgtcgtggctggtg
gacgaagaacgccgctcggccttcgaggacaccggccatcacttcgagagcggctatcac
ttgacgctggtgtacctgccgcctgaagaatcgcgcgctcgtgccgccaagatgctctac
gagaacacgccgacgaatggcgtggactggcgcgagcggctgcaagccttcgtcgcggaa
acggatcgggtctttgaccagctcgatggcgtcatgccggaaattgcctggctcgatgac
gcgcagaccctgacctacctgcacgcgaccatctcgacgcgacgctatcgcgtcggtgtg
cccgaggtgcctttccacatcgacgcgctgctggccgactcgccgctggttggcggcctg
gcccccatgctgggcgaccggcacctgcgcgtggtgtcggtgcggggctttccgacctcg
acctggccggggattctggacgacctcaaccgcctcggatttgcgtatcgctggagtacg
cgcttcctctgcatggacaaatccgaggcggaaaaagacctcgcccgcctgcgccgccag
tggttcgccaagcgcaagaacgtcatcgcgctgctgcgcgaaacgatcttccaacaggag
tcgccgctggtggacacggatgcctcgaacaaggcgaccgatgccgatgccgcgttgcag
gagctgggcagtgatcaagtcgccttcggctacctcaccgccacggtgacggtgctcgat
gccgacccggccgcagccgacgagaagctgcgcatggtggagcgcgtcatccagggccgg
ggcttcgtgaccatctccgaaacgctcaatgccgtggatgcgtggctgtcctcgctcccc
ggcaacgcctatgccaacgtgcgccagccgatcgtctcgacgctgaacctggcgcacatg
atgccggtgtcggccgtgtgggccggccccgagcgcaacgcgcatctggacggcccgcct
ctcatcgtgacgcgcaccgatggcgccacaccgtttcgcttggtcacgcacgatggcgac
gtgggccacatgctggtggccggcccgacgggcatgggcaagtcagtgctgctcgccacg
ctggcgatgcagttccgccgctacctcggctcgcgcatcttcgcgttcgatatggggcgt
tcgatgcgcgccacgatcctcgggcttggcggcgagcactacgacttgggcacggacggc
gaaatcgccttccagccgctcgcccgcattgaccgcgaaggctaccgcacctgggccgcc
gaatggatcgaaggccgtttgctgcatgaaggcgtagcagtcggcccggacgagaaagcc
gccatctggtcggcgctgggcagcttggccggtgcgcccgtcgagcagcgcacgatgacc
ggcctgtcggtgctgctgcaatcgaacgcgctgcgccaggcgctcgcgccctatgtgctg
ggcggcgcgcacggcaagctgctggatgccgaccacgaccggctgggcatggcggacgtg
cagggtttcgagatggaggagctgatgcacagcaaggccgccgtcatggccgtgctgcat
tacctctttgcgcgctttgacgaacgctttgacggtgcgcccacgatgctgatcctcgat
gaagcgtggctgttcctggatgacccggtgtttgccgcgcgcatccgccagtggctcaag
acgctgcgcaagaaaaacgtgtcggtgatcttcgccacgcagtcgctcgcggacattaag
gattcgagcatcgcgcccgcaatcatcgagagctgcgcaagccgcatcttcctgccgaac
ccgcaggcgaccgagccgcagattcgcacgatctacgagggcttcgggttgaactcgcgc
cagatcgagatcgtcgccaccgcgcaacccaagcgcgactactactaccaatcccgcctc
ggcaaccgcctgttcgacctcgacctgggggcggcgacgctggccttcgcgggcgcttcc
acgccgcaagaccagcgcgacatagaccgcgtgctgctggacgccggcacgcccggcttc
gcgggtgcctggctgcgccatcgcggcctcgattgggcggctgacctgctgccctcgttc
cccggcctcgcgccggattccctcgctgaccaaccacaggagatcctgccatga

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