Poecilia formosa (Amazon molly): 103129174
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Entry
103129174 CDS
T07984
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103129174
03036 Chromosome and associated proteins [BR:
pfor03036
]
103129174
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103129174
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103129174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103129174
NCBI-ProteinID:
XP_007540217
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MEDKKRKKEDKRKREASQKVAEQKNKVTDVTKPAAAQSPAAQSSSASPSPVPAPTAAPSP
ATSGPGSAAPPAPGGNNAKRLAVANGQPASNTGSSSAAGPGATGNGGAGGGAAQANQQPS
RYMPREVPPRFRCQQDHKVLLKRGQPPLSSMLLGGGGDGPNTNMAAASDSASSLALTSPS
VAASTNNYANSMWGASSGSQVPSQGKEKVIVDGNDLEEWPSIAGSDGGNGGTPVTSISAS
GGQPSPTSSFSLPNECMQLPNSAAWGSTAPQGHLGGGAAGPLLQQPSSVSKAPAVPGSHD
ASGPLDGSSGIPGANFSPNANPSAWPALVQQDGPAAANNAASMGLGGGAAGGLGGHPSIS
VNQSSAHQHQLHQMQSRDRDVGGGKWDGESAGPNISGGEGIGGGMDHGVGGARVGAGDPS
HAPSWRGQPYPAAYSKTGASRTDGWEGGAAEGDKGTLGWGYPSAENGGQTSGASQGGWGL
PVGADRGVSSSDWGGGSKPAAEEMGNCSSNSSSSSGSTAGNPPTASSSTVPAASRAWDNQ
KGDGEVGEWGDGAGGQGGHGGSSSSGGNSRSGSGPNGNRIRRQAPNAEAALQNLLSRSDL
DPRVLSNSGWGQTQIRQNTAWDVEEQSKASSKHPVALGGPRTLSTDSSGPGVSPSLVPST
GSSGEGWESSSNSSSSGASLSGRGPPTACTNMRNMSQSGSVAPGVGSGLTQGKAAGWGGG
DNHEAKDWGGEDWRGNSRAEKGGGWGEVGQQEKGTEGWKDVGGNDEGSGWGSKPKVGSGK
NWLEQESKSGGGWDDERRSGAHSGGDLGGGGWGNWDSSAPRRSWGAGGTGGGSGGGGGVD
GVGGMAPKPHQGWSGGNKMHQMPNSQPGSMPGPPAQPQQSQPRNQNPQLDQGAMQGGGGG
RKMAAQAQNQSSGWNSGPIPAGGGSGPEPSGWEEPSPQSISRKSEIDDGTSAWGDPTHYN
YKPVNLWDKNSGTASQQPHGPGQNQQPGPPVQQQPNRPTAALTEPSGWGGASPAAPAVDN
GTAAWGKPSDAPTGWGEADDAGGKPAGWGNAPSNSIRSGSKSMQDGWGEKESSVAASRHS
SWEDEEDGGGMWNSAGSQGSGSSWGQGSNGGWGQGNPGKKTGSKAPLKAAGDSWMSSINR
QFSNMGILSDEPGGPNMDLPPEKKLEAEKRGMAMNDYNGEMRKGGRGPSGGMLYRPGSKE
PAPADAASYYDKTSHLANQDGCLGDEAPRSLNSPPTAFKPHSLFSHSVPFRQGGHSIFGG
TGGMSQSRHQPGVPPINQSPGMRAQVPHQFLSAQVPGSMLKPMPPPSGAVGAVGGGVFPP
QLSPQHIAMLSIYPPQIQLQLACQLLLQQQQPPPQPMLQNQRKFSPNVHQQPDPQQLARI
MTVLQQQRQHQQIGGLGSGSKFSPSHHGGSGPKLPGAEALPHPGLAGSVADLQQKPFGPY
SGFGSAVNLPGLDLGGSMVGGAGAMKDPAAPQSRFKWMMEGSCSPDASSPENAFHKNGPI
TPIKMPGASHHSQFDLLVGDGASDGWHRTPGNKMAAKPSSAPSWPPEFQPGVPWKGIDRV
DPESDPYMTPGSMMGNAVSPGLNDSEHQLLQDNTDSTPPLNTLLPSPGAWPYSASDSLLN
NAHNSAKYTDYKTSWPPEPIGHKSWKASRSSIQAQLARPPPGLAGQKPPSSSPWSGGAPR
LAGRGWGSGATNTGSTWSDGNGRESCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLT
QGTALIRYGSKQEAAKAQSALHMCVLGNTTILAEFVSEEEVARYIAHSQAGGAGSEGAAA
GTGSNAGDRPGAATAAGGVEGSAPSSAAVSSSSGWQSLDGGPSDPAGAAQATGLGIFAQW
SSNGGGAAEASRPALWGGMGGYPGGGLWASPALEDRHQMGSPASLLPGDLLGGGADSI
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagacaaacggaaaagggaagcctctcagaaggtt
gcagagcaaaaaaacaaagtgacagacgtgaccaagccggctgctgcccagtctcccgcc
gcccagagcagctccgcctcccccagccctgtgcccgcccccactgccgctccgtccccg
gccacctcgggccccggcagcgctgcccccccggctccgggcggcaacaatgccaagcgc
ctggccgtggccaacggacagcccgcctccaacaccggctcttcctctgccgccggcccc
ggcgccactgggaacggcggcgcgggcggcggcgcagcccaggcgaatcagcagccatcg
cgctacatgccgagagaagtgccgccgcggtttcgctgccagcaggaccataaagtgcta
ctgaagagggggcagccgccgctgtcctccatgctgctgggaggcgggggcgatggcccg
aacacaaacatggctgctgcttcagattctgcatcttcattggctctcacctcaccatca
gttgctgcttctactaataattatgcaaattccatgtggggggcaagctcaggcagccag
gtcccctctcagggcaaggagaaggtcattgttgacggcaacgacctggaggagtggcct
agtattgctggcagcgatggaggaaacggcggcacgcctgtgacgagcatcagtgcctct
ggcggccaaccctcacccacttcctcgttctctttgcccaatgaatgtatgcagttgcct
aacagtgcggcgtgggggtcaactgccccccagggtcatcttggaggaggtgcagctggg
cctctgctgcaacagccctcctctgtttccaaagcccctgctgtgcccgggagccacgac
gccagtggccccctggatggtagcagtggaattccaggtgccaacttcagtccaaatgcc
aacccttcagcctggcctgctctggtgcagcaggacggccccgccgctgccaacaacgcc
gcctccatggggctggggggtggggcagccgggggcctggggggccacccatctatatct
gtgaatcagtcaagcgcccatcagcaccaacttcaccaaatgcaatccagagacagagac
gttggaggggggaagtgggacggtgaatcagcgggaccaaatatttcagggggggaaggg
attgggggaggaatggaccatggtgttgggggggccagggtaggtgcaggagacccgagc
catgccccctcctggagaggccaaccttaccctgcagcttactccaaaacgggtgcctca
aggactgacggatgggagggaggggcagcagaaggggataaagggactttgggttggggg
taccctagtgctgaaaatgggggtcaaacctccggggcatctcagggaggatgggggtta
ccagtgggagcggatcgaggggtttccagtagcgactggggtggcgggtcgaaacctgca
gctgaagaaatgggaaactgcagcagcaacagcagcagcagcagcggcagcactgcaggg
aacccccccactgcgtcctcatccaccgtccccgctgctagcagagcctgggacaatcag
aaaggagacggggaagttggggaatggggcgacggcgccggggggcaaggaggacacggg
ggttcttcatccagcggcggaaactcccgaagtggaagcgggcccaacggcaaccgcatt
cgtcgacaggcgcccaacgcagaagctgccttacagaacctgctcagccggtccgacctg
gacccgcgggtcctgtccaactccggctggggccagacgcagatccgccaaaacacggcc
tgggacgtcgaggaacaaagcaaagcttcatcaaaacaccccgtcgctctgggcggaccc
agaaccctcagcaccgactcgtcgggtccgggggtcagtccctcgttggttccctccacc
ggttcatcaggggaaggctgggagagcagcagcaacagcagcagcagtggggcgtctctg
tccggcagaggccccccaaccgcatgcaccaacatgaggaacatgtcgcagtctggatcg
gtggcacccggcgtggggtccgggctgacccagggcaaggcggcgggttgggggggaggg
gataatcatgaagccaaggactggggcggcgaagactggaggggcaacagtcgggcagaa
aagggcggaggatggggggaagtcggtcagcaggagaaagggacggagggctggaaggac
gtaggggggaacgacgaaggcagcggctggggatcaaaacccaaggttggatcgggtaag
aattggttggagcaagaatccaaatcgggtgggggttgggatgatgagaggaggagcggc
gcgcactcagggggggatttaggtggaggtggttgggggaactgggacagcagcgccccc
cggaggagctggggggcaggaggcacagggggagggagcggaggaggcggcggggtggat
ggcgttggaggcatggcgcccaaaccccaccagggttggagtggaggaaataaaatgcac
cagatgccaaacagccagccgggctccatgccaggcccgccggcgcaaccgcaacaatca
cagccccgcaatcagaacccgcagctggaccaaggggccatgcaaggtggcggcggcggg
aggaagatggccgctcaggcgcagaaccaaagctcaggctggaactccggaccaatccct
gccggaggcgggagtggaccagaaccgagcggctgggaagagccatccccgcagtccata
agcaggaagagcgagatcgacgacgggacgtctgcgtggggagacccgacccattacaac
tacaagccggttaacctgtgggacaagaacagcggcactgctagccagcagccgcacggg
ccgggtcagaaccagcagccgggaccgccggtccagcagcagcccaacaggccgactgcg
gcgctcacagaaccttcgggctggggcggcgcgtctccagctgctccggcggtggacaac
ggtacggcagcctgggggaaacccagcgacgctcccactggctggggggaagccgacgac
gccggggggaagccggcaggctggggaaacgctccgtcaaactccatcagatctggatcg
aagtctatgcaagacggctggggggagaaggagagttcggtggcggcgtcgcgccactcc
agctgggaggacgaggaggacggaggaggcatgtggaacagcgccggctcccagggcagc
ggctcctcctggggccagggcagcaacggaggctgggggcaaggcaacccgggcaagaag
accggcagcaaggctccgctgaaggctgcgggagattcctggatgagttccatcaacagg
cagttttccaacatggggattctgagcgacgagcccggcgggccgaacatggacctgccg
ccggagaagaagctggaggcggagaagagggggatggcgatgaacgactacaacggagag
atgaggaaaggaggaagagggccgagtggaggaatgctgtaccgtcccgggtccaaagag
ccggcgccagcggacgcagcgtcttactacgataagacctcacatttggccaatcaggat
ggttgccttggagacgaggcgcctcgctctctgaactcgcctcccaccgccttcaagccc
cattccctcttcagccactctgtcccctttagacaaggcggccacagtatctttggcggg
accggagggatgtcccagtcacggcatcagcccggtgtcccgcccataaaccagtcccca
gggatgcgagcacaagtgcctcatcagttcctgtctgcccaggtgccgggctccatgctg
aagccgatgccgcctcccagcggggcggtgggggccgtcgggggaggcgtgttcccccca
cagctgtccccgcagcacatcgccatgctcagcatctacccgcctcagatccagctgcag
ctggcttgtcagctcttactgcagcagcagcagccgccgccgcagccgatgctgcagaac
cagaggaagttctcaccaaacgttcatcagcagcccgaccctcagcagctggcccgcatc
atgaccgtcctgcagcagcagaggcagcaccagcagatcggcggcctggggtccggctcc
aagttctccccctcccaccacggcgggtcgggtcccaaactccccggcgccgaagcgctg
ccccatccgggcctggccgggtccgtggcggacctgcagcagaaacccttcggaccgtac
tcgggcttcggttctgctgtgaacctgccgggtctggacctgggcggctccatggtgggc
ggcgctggcgccatgaaggacccggcggcgcctcagtcccgcttcaaatggatgatggag
ggcagctgctcccccgacgcgtcttcaccggaaaacgctttccacaaaaacggcccaatc
acccccatcaagatgccaggcgcctcccatcactcccagtttgacttgctggttggagac
ggagcgagcgacggctggcatcgcaccccaggcaacaagatggccgccaagcccagcagc
gcccccagctggccgcccgagttccagcccggcgtgccgtggaagggaatcgaccgcgtc
gacccggagtccgacccgtacatgacgccggggagcatgatgggaaacgcggtctcaccc
ggcctcaacgactcggagcaccagctgctgcaagacaataccgactccaccccccccctg
aacaccttgctgccttcacctggtgcctggccctatagtgcctcagacagccttcttaac
aatgcacacaactcagcaaagtacacagactataagaccagctggcctccagaacccatt
ggacacaagtcctggaaagccagccgcagcagcatccaggcccagctggcccggcctccg
cccggcctggccggccagaagccgccgtcgtcctcgccctggtctggaggagcgccgcgg
ctcgctgggaggggctggggcagcggcgccaccaacaccggttcgacctggagcgacggg
aacggccgggaaagctgctggctggtgctcagtaacctcacgccgcagatcgacggctcc
accctgagaaccatctgcatgcagcacggccctctgctgacctttcacctcggcctgacc
cagggcactgctctgatccgctacggctccaaacaggaggcggccaaggcccagagcgcg
ctccacatgtgcgttctgggtaacaccaccatcttggcggagttcgtcagcgaggaagag
gtcgctcgttatattgcacattcccaggccggaggagcagggagcgaaggagccgccgcc
gggaccggcagcaacgccggcgaccggcctggagccgccaccgcggccgggggagtggaa
ggctccgccccttccagcgccgccgtgtcttccagctcagggtggcagagtctggacggc
ggcccgtcggacccggccggcgccgcccaggcgaccggcctcggcatcttcgcgcagtgg
agcagcaacggcggcggtgcggcggaggcgtcacggccggcgctgtggggtgggatgggg
gggtaccccggcggcggcctctgggcgtctccggcgctggaggaccgccaccagatgggg
agccccgcctccctgttgccgggtgacctgctgggcggcggcgccgactccatctga
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