Poecilia formosa (Amazon molly): 103144996
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Entry
103144996 CDS
T07984
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103144996 (ddx42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103144996 (ddx42)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103144996 (ddx42)
Spliceosome [BR:
pfor03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103144996 (ddx42)
Complex B
103144996 (ddx42)
Complex C
U2 SnRNP specific factors
103144996 (ddx42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103144996
NCBI-ProteinID:
XP_016531930
Ensembl:
ENSPFOG00000014104
UniProt:
A0A087Y818
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MNWNKGGPGVKRGFGFGGFSLAGKKEEPNVPPKSHTSLGASGSSGGYGKSPQLPSFYKIG
SKRANFDEENAYFEDDEEESSSNADLPYIPAENSPTRQQMKSGGGGGSDSEDDPLDAFMA
EVENQAAKDMRKLEEKEKKSTKGIRDDIEEEDEQEAYFRYMAENPTAGLTQEEEEENIDY
DSDGNPIPSTTKKIILPLPPIDHSEIDYPPFEKNFYNEHEELSILNGSQVLELRQKLNLR
VSGAAPPKPCTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSG
KTAAFIWPMLVHIMDQKELEPGEGPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYG
GGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADRMFDMGFEYQVR
SIASHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVELLLSGS
DKWNWLTRRLVEFTSTGSVLIFVTKKANSEELATNLTQEGYSLGLLHGDMDQSERNKVIS
DFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLL
TSKDTSFAGDLVRNLEGANQAVPKELMDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYKE
RPGLGSDSSERSSSLSSASSFEGYSKPTTGAMGDRMSALKQAFQTQYKSHFVAATSGPPK
LSTKSNSSSGWTSAGSLNSVPTEAANGSERPNMAAFSIPGFTSAGSLSSVPASPTGSQHS
SPPPAPPTHRETPRDRHGESQGRPGDGHHRHSDRSERHSGEDRYGDRDRHGDRDRDRHGD
RDRHSSRHSDSRNGDGSRRERDDRRGDRDGGDRASVEGRDRGSGEGRDRGSGEGRDRGSG
EGRDRGDDSFAVPDPPKRRKSRWDN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggtggtccaggagtgaagcgtgggtttggctttggaggtttttcc
cttgcagggaagaaagaggagcctaatgttcccccaaaatctcacacatcattaggcgct
tctggatcaagtggcggttatgggaaaagcccacagcttccgtctttctacaaaataggg
tctaaaagagctaattttgatgaagaaaacgcgtatttcgaagacgatgaagaagagtcc
agcagcaacgccgatctgccctacattcctgctgagaactcgcccacgcggcagcagatg
aagtcgggcggcggcggcggctcagacagcgaagacgaccctttggatgccttcatggca
gaggttgagaaccaagcagctaaagacatgaggaaactagaagaaaaggagaaaaaatca
accaagggtattcgtgatgacattgaggaagaagatgagcaggaagcgtatttccgctac
atggcagagaatcccacagcagggctgacccaggaggaagaggaggaaaacatcgactat
gacagtgatggaaacccaattccttctacaaccaagaaaataatcctgccgctgccacct
attgaccactcagagatcgactaccccccttttgagaaaaacttttacaatgaacacgag
gagcttagcattctcaacggcagccaagtgctcgagttgaggcagaaactcaacttgaga
gtttctggtgctgctcctcctaaaccttgcaccagctttgctcacttcggcttcgatgag
cagctgatgcatcagattcgaaagtctgagtacactcagcccacgccgatccagtgtcag
ggagttcccattgctctctctggacgcgacatgatcggcattgcaaagacagggagtggt
aaaacggcggcgttcatctggccgatgctggttcacatcatggaccagaaggagctggag
cccggagagggacccatcgcggtcatcgtgtgtcccaccagggagctctgtcagcagatc
catgcagagtgtaagcgttttgggaaagcgtactcgctgcgttccgtggctgtttacgga
ggcggcagcatgtgggagcaggccaaggctctgcaggagggagcagagatcgtcgtgtgc
acgccgggtcgcctgatcgaccatgttaaaaaaaaggcgacatccttacagagagtgaca
tatctggtgtttgatgaagctgatcgcatgtttgatatgggatttgaatatcaggtgaga
tcaattgcaagccatgttcgcccagacaggcagactcttctcttcagcgccacttttcgg
aaaaaaatcgagaggttggcgagggacattttagttgatcctattcgggttgtgcaaggc
gacatcggcgaggccaacgaggacgtgactcaggtggtggaactgctgctcagcgggtca
gacaaatggaactggctgacccgaaggctggtcgagttcacttccaccggttctgtgctc
attttcgtcaccaagaaggccaactccgaggagttggccactaacctgactcaggagggc
tacagcctcggcctcctgcacggagacatggaccaaagcgagaggaacaaagtcatcagc
gacttcaagaagaaaaatttacccgttctggtggccactgacgtagccgcccgcggtctg
gacatcccgtcaattcgcaccgtggtgaactacgatgtggcgcgcgacatcgacacgcac
actcacagaatcggccgaacgggtcgcgccggggagaaaggtgtcgcttacaccctcctg
accagcaaggacacttcgtttgccggcgacctggtgcgaaacctggagggagccaatcag
gccgttcccaaagagctcatggatttagccatgcagaatccctggttcaggaaatcgcgg
tttaagggaggaaaaggaaagaagctgaacatcggtggaggcggccttggttacaaagag
agaccgggtctggggtccgacagctctgaacgtagcagcagcttgtcttccgctagtagc
tttgaaggctacagcaaaccgacaactggggcgatgggggaccgcatgtctgcactgaaa
caagctttccagactcagtataagagccactttgtggcggcaaccagcggccctccgaag
ctcagcaccaagtccaacagctcctccggttggaccagcgccggcagcctgaactcggtg
ccaacagaggccgccaacggctctgaacgacccaacatggccgccttttcaatacctggt
ttcaccagcgccggctccctgagctccgtgcccgccagtccaaccggctcacagcacagc
agccctccacccgcacccccgacacacagagagaccccgcgggatcgacacggggagtcc
cagggtcgccccggcgacggccatcaccgccacagcgacaggagcgagcggcatagcggc
gaggatcgctacggtgaccgggaccgacacggagacagagatcgcgaccgccatggtgac
agggatcgccacagcagccgccacagcgacagccggaatggcgacggaagcagaagagag
agagatgaccggagaggggacagggatggcggagacagggcaagcgtggaggggagagac
aggggaagcggggaggggagggacagagggagcggggaggggagggacaggggaagcggg
gaggggagggacaggggagacgatagcttcgctgttcccgacccgccgaaacgcaggaag
agccgatgggataactaa
DBGET
integrated database retrieval system
